Strain Fitness in Shewanella oneidensis MR-1 around SO2488

Experiment: A22 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.003 mg/ml
2,610,278	-				-0.5
2,610,387	+				-2.2
2,610,412	+				-0.1
2,610,425	-				+0.8
2,610,451	-				-1.3
2,610,658	-	pgl	SO2488	0.36	-1.1
2,610,750	+	pgl	SO2488	0.49	-0.7
2,610,758	-	pgl	SO2488	0.51	-0.5
2,610,773	-	pgl	SO2488	0.53	+2.5
2,610,830	-	pgl	SO2488	0.61	-0.2
2,610,888	-	pgl	SO2488	0.69	-1.1
2,610,980	+	pgl	SO2488	0.82	-0.6
2,610,993	-	pgl	SO2488	0.84	-0.2
2,611,211	+				-0.2
2,611,251	-				-2.6
2,611,323	+	zwf	SO2489	0.14	-2.6
2,611,573	-	zwf	SO2489	0.31	-1.6
2,611,719	+	zwf	SO2489	0.41	-3.6