Strain Fitness in Shewanella oneidensis MR-1 around SO1603

Experiment: A22 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.003 mg/ml
1,685,312	-		SO1602	0.89	-0.3
1,685,368	+		SO1602	0.90	-0.7
1,685,670	+				-0.6
1,685,717	-				-0.1
1,685,733	+				-0.6
1,685,878	-				-1.6
1,686,024	+				-0.1
1,686,226	-				-0.5
1,686,308	+		SO1603	0.16	-0.4
1,686,338	+		SO1603	0.20	+0.3
1,686,391	+		SO1603	0.26	+0.1
1,686,406	+		SO1603	0.27	-1.5
1,686,418	+		SO1603	0.28	-0.4
1,686,448	-		SO1603	0.32	-0.2
1,686,528	+		SO1603	0.41	-1.0
1,686,528	+		SO1603	0.41	-0.4
1,686,529	-		SO1603	0.41	-0.5
1,686,639	+		SO1603	0.53	-1.3
1,686,647	-		SO1603	0.54	-0.3
1,686,658	+		SO1603	0.55	-1.9
1,686,685	+		SO1603	0.58	-0.8
1,686,685	+		SO1603	0.58	-0.3
1,686,693	-		SO1603	0.59	-0.5
1,686,693	-		SO1603	0.59	-0.8
1,686,693	-		SO1603	0.59	-0.4
1,686,693	-		SO1603	0.59	-0.3
1,686,731	-		SO1603	0.63	-0.2
1,686,761	+		SO1603	0.66	-0.8
1,686,769	-		SO1603	0.67	-0.2
1,686,784	+		SO1603	0.69	-1.7
1,687,028	-				-0.3
1,687,102	-				-1.4
1,687,170	-				+0.2
1,687,248	+				+0.7
1,687,640	+				+0.5
1,687,640	+				-1.1
1,687,640	+				-0.1
1,687,648	-				+0.0
1,687,648	-				+0.1
1,687,648	-				-0.2
1,687,648	-				+0.5
1,687,648	-				+0.3
1,687,648	-				-0.6
1,687,672	-				-0.4
1,687,734	+				-0.3
1,687,734	+				-0.7
1,687,791	-				-1.2
1,687,841	+		SO1604	0.11	+0.4
1,687,876	-		SO1604	0.15	-0.5
1,687,885	+		SO1604	0.16	-0.9
1,687,904	-		SO1604	0.18	-0.6
1,687,991	+		SO1604	0.27	-0.9
1,688,011	+		SO1604	0.29	-1.3
1,688,019	-		SO1604	0.30	-0.6