Strain Fitness in Shewanella amazonensis SB2B around Sama_2814

Experiment: A22 0.021875 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.021875 mg/ml
3,351,006	+		Sama_2812	0.70	+1.2
3,351,006	+		Sama_2812	0.70	-2.8
3,351,006	+		Sama_2812	0.70	+0.3
3,351,006	+		Sama_2812	0.70	-0.3
3,351,007	-		Sama_2812	0.70	+1.2
3,351,007	-		Sama_2812	0.70	-0.7
3,351,007	-		Sama_2812	0.70	-1.7
3,351,007	-		Sama_2812	0.70	+0.2
3,351,016	+		Sama_2812	0.72	-0.9
3,351,121	+		Sama_2812	0.89	+0.9
3,351,121	+		Sama_2812	0.89	-1.7
3,351,121	+		Sama_2812	0.89	-0.7
3,351,121	+		Sama_2812	0.89	-0.8
3,351,121	+		Sama_2812	0.89	-0.6
3,351,121	+		Sama_2812	0.89	+1.4
3,351,121	+		Sama_2812	0.89	-0.2
3,351,121	+		Sama_2812	0.89	-0.2
3,351,121	+		Sama_2812	0.89	+0.4
3,351,121	+		Sama_2812	0.89	+0.2
3,351,121	+		Sama_2812	0.89	-1.9
3,351,121	+		Sama_2812	0.89	-1.4
3,351,121	+		Sama_2812	0.89	-1.7
3,351,122	-		Sama_2812	0.89	-0.5
3,351,122	-		Sama_2812	0.89	-0.6
3,351,122	-		Sama_2812	0.89	+0.1
3,351,122	-		Sama_2812	0.89	+0.1
3,351,122	-		Sama_2812	0.89	-0.2
3,351,122	-		Sama_2812	0.89	-1.1
3,351,122	-		Sama_2812	0.89	-0.4
3,351,122	-		Sama_2812	0.89	+0.8
3,351,122	-		Sama_2812	0.89	-1.3
3,351,122	-		Sama_2812	0.89	+0.5
3,351,122	-		Sama_2812	0.89	-0.3
3,351,242	+				+0.8
3,351,299	-	djlA	Sama_2813	0.12	+0.2
3,351,376	-	djlA	Sama_2813	0.22	+0.1
3,351,389	-	djlA	Sama_2813	0.23	+0.1
3,351,389	-	djlA	Sama_2813	0.23	-0.7
3,351,395	-	djlA	Sama_2813	0.24	-0.3
3,351,395	-	djlA	Sama_2813	0.24	-0.2
3,351,404	+	djlA	Sama_2813	0.25	-0.2
3,351,405	-	djlA	Sama_2813	0.26	-0.5
3,351,523	+	djlA	Sama_2813	0.41	+0.8
3,351,574	+	djlA	Sama_2813	0.47	-2.0
3,351,575	-	djlA	Sama_2813	0.48	-0.8
3,351,730	+	djlA	Sama_2813	0.68	+0.2
3,351,730	+	djlA	Sama_2813	0.68	+0.2
3,351,731	-	djlA	Sama_2813	0.68	-0.1
3,351,731	-	djlA	Sama_2813	0.68	+0.7
3,351,731	-	djlA	Sama_2813	0.68	+0.1
3,351,731	-	djlA	Sama_2813	0.68	+0.5
3,351,936	+				+0.1
3,351,936	+				-0.8
3,351,937	-				+0.1
3,351,937	-				+0.4
3,351,937	-				-0.7
3,351,971	+				-0.5
3,351,972	-				+0.1
3,351,972	-				+0.7
3,351,978	+				+0.9
3,351,989	+				-0.4
3,351,990	-				-0.1
3,351,990	-				+0.6
3,351,990	-				-0.8
3,352,005	+				+0.6
3,352,006	-				+0.6
3,352,006	-				-0.6
3,352,006	-				-0.4
3,352,006	-				+0.2
3,352,166	+		Sama_2814	0.26	-0.2
3,352,166	+		Sama_2814	0.26	-1.1
3,352,166	+		Sama_2814	0.26	+0.3
3,352,166	+		Sama_2814	0.26	-2.4
3,352,167	-		Sama_2814	0.26	+0.2
3,352,167	-		Sama_2814	0.26	-0.3
3,352,167	-		Sama_2814	0.26	-0.1
3,352,167	-		Sama_2814	0.26	-0.7
3,352,188	+		Sama_2814	0.29	-0.2
3,352,275	-		Sama_2814	0.42	+1.4
3,352,275	-		Sama_2814	0.42	-0.5
3,352,341	+		Sama_2814	0.52	-1.0
3,352,342	-		Sama_2814	0.52	-0.9
3,352,342	-		Sama_2814	0.52	-1.0
3,352,343	+		Sama_2814	0.52	+0.8
3,352,343	+		Sama_2814	0.52	-1.0
3,352,343	+		Sama_2814	0.52	+2.4
3,352,343	+		Sama_2814	0.52	-1.6
3,352,344	-		Sama_2814	0.52	+0.8
3,352,344	-		Sama_2814	0.52	-0.5
3,352,344	-		Sama_2814	0.52	-0.9
3,352,344	-		Sama_2814	0.52	-0.8
3,352,344	-		Sama_2814	0.52	-0.1
3,352,344	-		Sama_2814	0.52	-0.7
3,352,344	-		Sama_2814	0.52	-0.8
3,352,347	+		Sama_2814	0.53	+0.8
3,352,347	+		Sama_2814	0.53	-1.4
3,352,347	+		Sama_2814	0.53	-2.3
3,352,347	+		Sama_2814	0.53	-1.5
3,352,348	-		Sama_2814	0.53	+0.1
3,352,348	-		Sama_2814	0.53	-1.5
3,352,398	+		Sama_2814	0.60	-1.8
3,352,399	-		Sama_2814	0.60	-1.4
3,352,443	-		Sama_2814	0.67	-0.5
3,352,443	-		Sama_2814	0.67	-0.5
3,352,562	+		Sama_2814	0.84	-0.5
3,352,562	+		Sama_2814	0.84	+0.6
3,352,563	-		Sama_2814	0.84	+0.6
3,352,706	+				-0.3
3,352,707	-				+0.9
3,352,758	-				+0.9
3,352,760	-				-1.2
3,352,760	-				+0.8
3,352,760	-				-0.2
3,352,760	-				+0.7
3,352,760	-				-1.9
3,352,760	-				-0.3
3,352,760	-				+0.2
3,352,760	-				-1.4
3,352,845	-		Sama_2815	0.17	-0.0
3,352,845	-		Sama_2815	0.17	+0.5
3,352,845	-		Sama_2815	0.17	-0.7
3,352,845	-		Sama_2815	0.17	-1.8
3,352,892	+		Sama_2815	0.22	+0.6
3,352,892	+		Sama_2815	0.22	+1.1
3,352,893	-		Sama_2815	0.22	+0.3
3,352,893	-		Sama_2815	0.22	+1.4
3,352,893	-		Sama_2815	0.22	-0.2
3,352,893	-		Sama_2815	0.22	-0.3
3,352,893	-		Sama_2815	0.22	-0.8
3,352,893	-		Sama_2815	0.22	+1.8
3,352,893	-		Sama_2815	0.22	-0.2
3,352,893	-		Sama_2815	0.22	+1.1
3,352,985	-		Sama_2815	0.31	-0.7
3,352,985	-		Sama_2815	0.31	+0.0
3,352,985	-		Sama_2815	0.31	+0.5
3,353,014	+		Sama_2815	0.33	+0.3
3,353,014	+		Sama_2815	0.33	-0.2
3,353,014	+		Sama_2815	0.33	-1.7
3,353,014	+		Sama_2815	0.33	+0.7
3,353,014	+		Sama_2815	0.33	-1.7
3,353,015	-		Sama_2815	0.33	-1.9
3,353,015	-		Sama_2815	0.33	-1.9
3,353,015	-		Sama_2815	0.33	-0.1
3,353,015	-		Sama_2815	0.33	+1.2
3,353,015	-		Sama_2815	0.33	+0.3
3,353,015	-		Sama_2815	0.33	+0.4
3,353,015	-		Sama_2815	0.33	+0.9
3,353,015	-		Sama_2815	0.33	+1.5
3,353,015	-		Sama_2815	0.33	+0.5
3,353,057	+		Sama_2815	0.37	+0.3
3,353,058	-		Sama_2815	0.38	-0.3
3,353,058	-		Sama_2815	0.38	-1.0
3,353,058	-		Sama_2815	0.38	-0.2
3,353,058	-		Sama_2815	0.38	-0.5
3,353,058	-		Sama_2815	0.38	-0.2
3,353,058	-		Sama_2815	0.38	+1.0
3,353,058	-		Sama_2815	0.38	+0.1
3,353,058	-		Sama_2815	0.38	-0.8
3,353,084	+		Sama_2815	0.40	+0.2
3,353,147	+		Sama_2815	0.46	+1.5
3,353,148	-		Sama_2815	0.46	-0.9
3,353,187	+		Sama_2815	0.50	+0.4
3,353,187	+		Sama_2815	0.50	-0.2
3,353,188	-		Sama_2815	0.50	+0.6
3,353,226	-		Sama_2815	0.54	+0.6
3,353,248	-		Sama_2815	0.56	-0.3
3,353,248	-		Sama_2815	0.56	-0.7
3,353,263	+		Sama_2815	0.57	+0.5
3,353,264	-		Sama_2815	0.57	+1.2
3,353,335	+		Sama_2815	0.64	-0.2
3,353,379	+		Sama_2815	0.68	-0.5
3,353,379	+		Sama_2815	0.68	-0.5
3,353,380	-		Sama_2815	0.68	-0.2
3,353,380	-		Sama_2815	0.68	+1.8
3,353,380	-		Sama_2815	0.68	+0.4
3,353,380	-		Sama_2815	0.68	+0.8
3,353,380	-		Sama_2815	0.68	+0.6
3,353,405	+		Sama_2815	0.71	+0.2
3,353,405	+		Sama_2815	0.71	-0.1
3,353,406	-		Sama_2815	0.71	-0.2
3,353,406	-		Sama_2815	0.71	-0.4
3,353,406	-		Sama_2815	0.71	-0.0
3,353,464	+		Sama_2815	0.76	-0.4
3,353,560	+		Sama_2815	0.85	-1.0
3,353,636	+				-1.0
3,353,636	+				-0.1
3,353,636	+				-0.7
3,353,637	-				-1.3
3,353,637	-				+0.4
3,353,637	-				-0.7