Strain Fitness in Shewanella amazonensis SB2B around Sama_2181

Experiment: A22 0.021875 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.021875 mg/ml
2,636,798	+				-0.8
2,636,798	+				-1.3
2,636,874	+				+1.0
2,636,875	-				-1.4
2,636,875	-				+0.6
2,636,875	-				-0.4
2,637,012	+		Sama_2180	0.14	+1.1
2,637,013	-		Sama_2180	0.14	+0.8
2,637,075	+		Sama_2180	0.23	-1.0
2,637,076	-		Sama_2180	0.23	-0.7
2,637,076	-		Sama_2180	0.23	+1.0
2,637,076	-		Sama_2180	0.23	-0.8
2,637,091	-		Sama_2180	0.25	-2.5
2,637,128	+		Sama_2180	0.30	-1.6
2,637,129	-		Sama_2180	0.30	-0.7
2,637,245	+		Sama_2180	0.46	+0.6
2,637,267	-		Sama_2180	0.50	-0.1
2,637,299	+		Sama_2180	0.54	-0.3
2,637,299	+		Sama_2180	0.54	-0.0
2,637,299	+		Sama_2180	0.54	-0.2
2,637,299	+		Sama_2180	0.54	+1.3
2,637,300	-		Sama_2180	0.54	-0.2
2,637,317	-		Sama_2180	0.56	+0.8
2,637,324	+		Sama_2180	0.57	-0.2
2,637,325	-		Sama_2180	0.58	+1.3
2,637,408	+		Sama_2180	0.69	-0.7
2,637,545	-		Sama_2180	0.88	-1.0
2,637,545	-		Sama_2180	0.88	-0.2
2,637,545	-		Sama_2180	0.88	-0.1
2,637,565	+				+0.4
2,637,565	+				+0.0
2,637,566	-				-1.3
2,637,566	-				-1.3
2,637,566	-				-0.0
2,637,577	+				-0.2
2,637,578	-				+1.9
2,637,578	-				-1.0
2,637,580	+				-0.7
2,637,608	-				-0.9
2,637,608	-				+0.7
2,637,611	+				+0.1
2,637,612	-				-0.3
2,637,614	+				-0.6
2,637,615	-				-1.1
2,637,650	-				-0.5
2,637,662	+				-0.8
2,637,663	-				-0.2
2,637,764	-				-0.0
2,637,841	-				+0.6
2,637,841	-				-0.9
2,637,843	+				-2.0
2,637,843	+				+0.0
2,637,843	+				-0.2
2,637,843	+				+0.2
2,637,844	-				+0.2
2,637,844	-				-2.4
2,637,844	-				-1.3
2,637,844	-				-1.6
2,637,866	+		Sama_2181	0.10	-1.6
2,637,866	+		Sama_2181	0.10	-1.7
2,637,866	+		Sama_2181	0.10	-0.0
2,637,866	+		Sama_2181	0.10	-0.2
2,637,867	-		Sama_2181	0.10	-0.7
2,637,867	-		Sama_2181	0.10	+0.9
2,637,867	-		Sama_2181	0.10	+0.0
2,637,867	-		Sama_2181	0.10	+0.2
2,637,867	-		Sama_2181	0.10	-0.2
2,637,907	+		Sama_2181	0.14	+0.8
2,638,044	-		Sama_2181	0.28	-0.2
2,638,044	-		Sama_2181	0.28	-1.4
2,638,201	-		Sama_2181	0.44	+1.0
2,638,227	-		Sama_2181	0.46	-0.9
2,638,238	+		Sama_2181	0.48	-1.6
2,638,239	-		Sama_2181	0.48	-0.7
2,638,239	-		Sama_2181	0.48	+0.1
2,638,239	-		Sama_2181	0.48	+0.5
2,638,239	-		Sama_2181	0.48	-0.7
2,638,239	-		Sama_2181	0.48	-0.2
2,638,367	+		Sama_2181	0.61	+0.2
2,638,448	-		Sama_2181	0.69	+0.3
2,638,488	+		Sama_2181	0.73	-1.4
2,638,488	+		Sama_2181	0.73	-1.7
2,638,489	-		Sama_2181	0.73	-0.8
2,638,492	+		Sama_2181	0.73	+0.2
2,638,492	+		Sama_2181	0.73	-1.4
2,638,493	-		Sama_2181	0.73	+0.4
2,638,493	-		Sama_2181	0.73	+1.2
2,638,493	-		Sama_2181	0.73	-0.4
2,638,493	-		Sama_2181	0.73	-0.0
2,638,493	-		Sama_2181	0.73	+0.2
2,638,552	-		Sama_2181	0.79	-0.8
2,638,622	+		Sama_2181	0.86	-0.6
2,638,622	+		Sama_2181	0.86	-1.2
2,638,622	+		Sama_2181	0.86	-1.4
2,638,622	+		Sama_2181	0.86	-0.8
2,638,624	+		Sama_2181	0.86	-0.2
2,638,624	+		Sama_2181	0.86	+2.1
2,638,624	+		Sama_2181	0.86	-0.2
2,638,624	+		Sama_2181	0.86	+0.2
2,638,625	-		Sama_2181	0.86	+1.6
2,638,625	-		Sama_2181	0.86	+0.2
2,638,625	-		Sama_2181	0.86	-0.0
2,638,625	-		Sama_2181	0.86	-0.6
2,638,625	-		Sama_2181	0.86	-0.4
2,638,625	-		Sama_2181	0.86	-0.6
2,638,625	-		Sama_2181	0.86	-1.4
2,638,625	-		Sama_2181	0.86	-0.0
2,638,625	-		Sama_2181	0.86	-1.6
2,638,690	-				-0.2
2,638,740	-				-0.4
2,638,740	-				-0.8
2,638,746	+				+0.2
2,638,746	+				+0.4
2,638,795	+				+0.6
2,639,032	+				-0.5
2,639,033	-				+0.2
2,639,033	-				+0.4
2,639,037	-				+1.6
2,639,043	+				+0.3
2,639,099	-		Sama_2182	0.10	+0.2
2,639,117	-		Sama_2182	0.11	-1.1
2,639,117	-		Sama_2182	0.11	-0.7
2,639,127	+		Sama_2182	0.11	-1.0
2,639,127	+		Sama_2182	0.11	+0.2
2,639,192	+		Sama_2182	0.13	-1.0
2,639,219	+		Sama_2182	0.14	-0.9
2,639,219	+		Sama_2182	0.14	+0.8
2,639,220	-		Sama_2182	0.14	-0.6
2,639,307	-		Sama_2182	0.17	-0.2
2,639,307	-		Sama_2182	0.17	+0.9
2,639,307	-		Sama_2182	0.17	+0.2
2,639,334	+		Sama_2182	0.18	-1.2
2,639,334	+		Sama_2182	0.18	-2.4
2,639,334	+		Sama_2182	0.18	+0.2
2,639,335	-		Sama_2182	0.18	+0.3
2,639,335	-		Sama_2182	0.18	+0.6
2,639,372	+		Sama_2182	0.19	+1.4
2,639,409	+		Sama_2182	0.20	+1.4
2,639,439	-		Sama_2182	0.21	-0.3
2,639,495	-		Sama_2182	0.23	+0.3
2,639,512	+		Sama_2182	0.23	-0.1
2,639,512	+		Sama_2182	0.23	+0.1
2,639,512	+		Sama_2182	0.23	-0.8
2,639,513	-		Sama_2182	0.23	-0.8
2,639,586	+		Sama_2182	0.25	+1.0
2,639,587	-		Sama_2182	0.25	-0.2
2,639,667	+		Sama_2182	0.28	-0.4
2,639,745	-		Sama_2182	0.30	+0.2
2,639,745	-		Sama_2182	0.30	-0.7
2,639,745	-		Sama_2182	0.30	+0.3