Strain Fitness in Shewanella amazonensis SB2B around Sama_1370

Experiment: A22 0.021875 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.021875 mg/ml
1,660,405	+		Sama_1368	0.41	+0.0
1,660,405	+		Sama_1368	0.41	-2.3
1,660,405	+		Sama_1368	0.41	-0.4
1,660,405	+		Sama_1368	0.41	-0.2
1,660,406	-		Sama_1368	0.41	-0.2
1,660,406	-		Sama_1368	0.41	-1.0
1,660,406	-		Sama_1368	0.41	-0.6
1,660,406	-		Sama_1368	0.41	+0.3
1,660,406	-		Sama_1368	0.41	+0.3
1,660,409	+		Sama_1368	0.41	-1.0
1,660,409	+		Sama_1368	0.41	-0.2
1,660,409	+		Sama_1368	0.41	+1.9
1,660,409	+		Sama_1368	0.41	+1.6
1,660,409	+		Sama_1368	0.41	+0.4
1,660,409	+		Sama_1368	0.41	-0.2
1,660,410	-		Sama_1368	0.41	-1.0
1,660,438	+		Sama_1368	0.45	+0.2
1,660,438	+		Sama_1368	0.45	-1.9
1,660,439	-		Sama_1368	0.45	-1.0
1,660,650	+		Sama_1368	0.69	-0.2
1,660,651	-		Sama_1368	0.69	-0.1
1,660,651	-		Sama_1368	0.69	+0.3
1,660,786	+		Sama_1368	0.85	+0.7
1,660,787	-		Sama_1368	0.85	-0.1
1,660,788	+		Sama_1368	0.85	-0.3
1,660,788	+		Sama_1368	0.85	+0.5
1,660,788	+		Sama_1368	0.85	+0.8
1,660,788	+		Sama_1368	0.85	-1.2
1,660,788	+		Sama_1368	0.85	-0.6
1,660,788	+		Sama_1368	0.85	+0.5
1,660,788	+		Sama_1368	0.85	-0.7
1,660,788	+		Sama_1368	0.85	-1.9
1,660,788	+		Sama_1368	0.85	-0.7
1,660,788	+		Sama_1368	0.85	-1.3
1,660,788	+		Sama_1368	0.85	-0.4
1,660,789	-		Sama_1368	0.85	-0.1
1,660,789	-		Sama_1368	0.85	+1.6
1,660,789	-		Sama_1368	0.85	-1.2
1,660,789	-		Sama_1368	0.85	-0.4
1,660,794	-		Sama_1368	0.86	+0.2
1,660,794	-		Sama_1368	0.86	-0.3
1,660,877	+				-0.2
1,660,898	+				+0.8
1,660,898	+				-0.9
1,660,898	+				-0.2
1,661,204	+		Sama_1369	0.70	-1.6
1,661,221	+		Sama_1369	0.74	+0.0
1,661,221	+		Sama_1369	0.74	+0.6
1,661,221	+		Sama_1369	0.74	-0.4
1,661,222	-		Sama_1369	0.74	-1.0
1,661,255	+		Sama_1369	0.82	+0.6
1,661,325	-				+1.1
1,661,474	+		Sama_1370	0.24	-2.2
1,661,474	+		Sama_1370	0.24	-1.3
1,661,475	-		Sama_1370	0.24	+0.9
1,661,475	-		Sama_1370	0.24	+0.2
1,661,475	-		Sama_1370	0.24	-0.4
1,661,475	-		Sama_1370	0.24	+1.2
1,661,475	-		Sama_1370	0.24	+0.4
1,661,475	-		Sama_1370	0.24	-0.2
1,661,475	-		Sama_1370	0.24	-0.3
1,661,565	-		Sama_1370	0.39	-0.1
1,661,948	-				+0.6
1,661,948	-				+0.6
1,661,948	-				-0.1
1,662,035	-				-0.2
1,662,035	-				+0.3
1,662,035	-				+1.2
1,662,035	-				-1.2
1,662,049	-				+1.9
1,662,123	-				-0.5
1,662,168	+				+1.0
1,662,422	-				-0.2
1,662,447	+				+0.4
1,662,448	-				+0.6
1,662,521	+		Sama_1371	0.13	-1.0
1,662,524	+		Sama_1371	0.14	+0.2
1,662,525	-		Sama_1371	0.14	+0.0
1,662,636	+		Sama_1371	0.31	+1.3
1,662,636	+		Sama_1371	0.31	+0.9
1,662,637	-		Sama_1371	0.31	+1.3
1,662,765	+		Sama_1371	0.51	-1.4
1,662,765	+		Sama_1371	0.51	-0.9
1,662,765	+		Sama_1371	0.51	+1.2
1,662,798	+		Sama_1371	0.57	-0.5
1,662,798	+		Sama_1371	0.57	+0.1
1,662,819	+		Sama_1371	0.60	+0.0
1,662,819	+		Sama_1371	0.60	+0.0
1,662,820	-		Sama_1371	0.60	+0.6
1,662,820	-		Sama_1371	0.60	+0.0
1,662,914	-		Sama_1371	0.75	+0.9