Strain Fitness in Shewanella amazonensis SB2B around Sama_0945

Experiment: A22 0.021875 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.021875 mg/ml
1,143,653	-				-0.8
1,143,653	-				-1.1
1,143,660	+				+0.2
1,143,662	+				+0.3
1,143,662	+				-1.3
1,143,662	+				+0.3
1,143,662	+				-0.2
1,143,662	+				-0.1
1,143,662	+				-1.0
1,143,662	+				-0.1
1,143,662	+				-1.3
1,143,662	+				-1.2
1,143,662	+				-0.8
1,143,663	-				+0.4
1,143,663	-				-1.3
1,143,663	-				-0.1
1,143,663	-				-0.5
1,143,663	-				+0.3
1,143,663	-				-0.1
1,143,663	-				-0.7
1,143,663	-				+1.2
1,143,679	-				+0.2
1,143,679	-				-0.1
1,143,697	+				-0.4
1,143,697	+				+0.9
1,143,697	+				+0.2
1,143,697	+				-0.5
1,143,697	+				+0.6
1,143,899	+		Sama_0944	0.31	+0.2
1,143,899	+		Sama_0944	0.31	-0.3
1,143,900	-		Sama_0944	0.31	-0.3
1,143,931	+		Sama_0944	0.34	-0.8
1,143,931	+		Sama_0944	0.34	+0.9
1,143,931	+		Sama_0944	0.34	+1.1
1,143,931	+		Sama_0944	0.34	+0.2
1,143,931	+		Sama_0944	0.34	-1.1
1,143,931	+		Sama_0944	0.34	+0.2
1,143,931	+		Sama_0944	0.34	-1.2
1,143,932	-		Sama_0944	0.35	-0.6
1,143,932	-		Sama_0944	0.35	+0.2
1,143,932	-		Sama_0944	0.35	+0.5
1,143,932	-		Sama_0944	0.35	-0.1
1,143,932	-		Sama_0944	0.35	+0.2
1,143,932	-		Sama_0944	0.35	-0.4
1,143,932	-		Sama_0944	0.35	+0.6
1,143,947	+		Sama_0944	0.36	+0.2
1,143,947	+		Sama_0944	0.36	-0.6
1,143,947	+		Sama_0944	0.36	-0.1
1,143,948	-		Sama_0944	0.36	-0.2
1,143,948	-		Sama_0944	0.36	+1.6
1,143,948	-		Sama_0944	0.36	-0.2
1,144,021	+		Sama_0944	0.44	+1.0
1,144,021	+		Sama_0944	0.44	+0.5
1,144,021	+		Sama_0944	0.44	-0.3
1,144,021	+		Sama_0944	0.44	+3.3
1,144,047	+		Sama_0944	0.47	-0.1
1,144,127	+		Sama_0944	0.56	+0.5
1,144,127	+		Sama_0944	0.56	-1.1
1,144,127	+		Sama_0944	0.56	+0.2
1,144,127	+		Sama_0944	0.56	+0.2
1,144,128	-		Sama_0944	0.56	-0.3
1,144,246	+		Sama_0944	0.69	+0.0
1,144,330	+		Sama_0944	0.78	+0.2
1,144,330	+		Sama_0944	0.78	+0.9
1,144,330	+		Sama_0944	0.78	+0.1
1,144,331	-		Sama_0944	0.79	+0.9
1,144,360	-		Sama_0944	0.82	+1.0
1,144,491	+				-0.7
1,144,503	+				+0.9
1,144,503	+				-0.1
1,144,503	+				-2.1
1,144,503	+				+1.0
1,144,504	-				-0.5
1,144,504	-				-0.3
1,144,504	-				+0.2
1,144,504	-				+1.3
1,144,538	-				+0.2
1,144,543	+				-0.3
1,144,543	+				+0.4
1,144,544	-				+0.5
1,144,544	-				-1.0
1,144,556	+				-0.1
1,144,556	+				+0.5
1,144,556	+				-0.3
1,144,557	-				-1.3
1,144,557	-				+0.3
1,144,557	-				+0.6
1,144,557	-				-0.8
1,144,557	-				+0.3
1,144,577	+				-0.4
1,144,578	-				+0.3
1,144,682	+		Sama_0945	0.11	+1.3
1,144,683	-		Sama_0945	0.11	+0.2
1,144,736	-		Sama_0945	0.17	+1.0
1,144,746	+		Sama_0945	0.18	+0.9
1,144,746	+		Sama_0945	0.18	-1.1
1,144,746	+		Sama_0945	0.18	+0.5
1,144,746	+		Sama_0945	0.18	-0.5
1,144,747	-		Sama_0945	0.18	+0.2
1,144,747	-		Sama_0945	0.18	-1.4
1,144,775	+		Sama_0945	0.21	+1.4
1,144,775	+		Sama_0945	0.21	+1.6
1,144,775	+		Sama_0945	0.21	-0.9
1,144,775	+		Sama_0945	0.21	-0.4
1,144,776	-		Sama_0945	0.21	+0.3
1,144,776	-		Sama_0945	0.21	+1.7
1,144,776	-		Sama_0945	0.21	-0.3
1,144,809	+		Sama_0945	0.24	-0.0
1,144,815	-		Sama_0945	0.25	+0.3
1,144,815	-		Sama_0945	0.25	+0.3
1,144,815	-		Sama_0945	0.25	+1.4
1,144,878	-		Sama_0945	0.31	+1.5
1,144,878	-		Sama_0945	0.31	+0.7
1,144,963	+		Sama_0945	0.39	+0.6
1,144,963	+		Sama_0945	0.39	+0.7
1,144,963	+		Sama_0945	0.39	-0.8
1,144,963	+		Sama_0945	0.39	-0.7
1,144,963	+		Sama_0945	0.39	-0.1
1,144,963	+		Sama_0945	0.39	+0.3
1,144,963	+		Sama_0945	0.39	+0.1
1,144,963	+		Sama_0945	0.39	+1.0
1,144,963	+		Sama_0945	0.39	+0.7
1,144,963	+		Sama_0945	0.39	-0.3
1,144,964	-		Sama_0945	0.40	+0.2
1,144,964	-		Sama_0945	0.40	+0.1
1,144,964	-		Sama_0945	0.40	+0.7
1,144,964	-		Sama_0945	0.40	+0.7
1,144,964	-		Sama_0945	0.40	+0.4
1,144,964	-		Sama_0945	0.40	+0.1
1,144,965	+		Sama_0945	0.40	-1.7
1,144,966	+		Sama_0945	0.40	-0.3
1,144,966	+		Sama_0945	0.40	-0.2
1,144,966	+		Sama_0945	0.40	-1.1
1,144,966	+		Sama_0945	0.40	+0.4
1,144,966	+		Sama_0945	0.40	-0.4
1,144,966	+		Sama_0945	0.40	+0.2
1,144,967	-		Sama_0945	0.40	-0.9
1,144,967	-		Sama_0945	0.40	+1.0
1,144,967	-		Sama_0945	0.40	+0.7
1,144,967	-		Sama_0945	0.40	-0.7
1,144,967	-		Sama_0945	0.40	-0.3
1,144,967	-		Sama_0945	0.40	-0.5
1,144,967	-		Sama_0945	0.40	+0.4
1,144,967	-		Sama_0945	0.40	+0.1
1,144,967	-		Sama_0945	0.40	-0.4
1,144,967	-		Sama_0945	0.40	-1.1
1,144,967	-		Sama_0945	0.40	-1.0
1,144,967	-		Sama_0945	0.40	+0.6
1,145,025	+		Sama_0945	0.46	-1.4
1,145,025	+		Sama_0945	0.46	+0.1
1,145,026	-		Sama_0945	0.46	-0.4
1,145,026	-		Sama_0945	0.46	+0.7
1,145,151	-		Sama_0945	0.58	-2.0
1,145,162	+		Sama_0945	0.59	-1.3
1,145,208	+		Sama_0945	0.64	+0.4
1,145,240	+		Sama_0945	0.67	-0.0
1,145,240	+		Sama_0945	0.67	+1.3
1,145,240	+		Sama_0945	0.67	-0.3
1,145,240	+		Sama_0945	0.67	-0.1
1,145,255	+		Sama_0945	0.69	-0.1
1,145,256	-		Sama_0945	0.69	+0.2
1,145,358	+		Sama_0945	0.79	-0.8
1,145,359	-		Sama_0945	0.79	+0.2
1,145,359	-		Sama_0945	0.79	-0.3
1,145,359	-		Sama_0945	0.79	-1.3
1,145,359	-		Sama_0945	0.79	+0.4
1,145,359	-		Sama_0945	0.79	-0.5
1,145,481	+				-1.4
1,145,481	+				-0.8
1,145,481	+				-0.9
1,145,481	+				+0.7
1,145,481	+				-0.6
1,145,481	+				+1.4
1,145,482	-				-0.1
1,145,482	-				+0.6
1,145,553	-				+0.9
1,145,566	-				-0.5
1,145,566	-				-0.5
1,145,566	-				+0.5
1,145,709	-		Sama_0946	0.11	+0.2
1,145,740	-		Sama_0946	0.13	+0.0
1,145,755	-		Sama_0946	0.15	-1.3
1,145,779	-		Sama_0946	0.17	-3.3
1,145,848	+		Sama_0946	0.23	-2.1
1,145,848	+		Sama_0946	0.23	-0.5
1,145,876	+		Sama_0946	0.25	-0.8
1,145,876	+		Sama_0946	0.25	-0.4
1,145,877	-		Sama_0946	0.26	-0.3
1,145,877	-		Sama_0946	0.26	+1.2
1,145,877	-		Sama_0946	0.26	+1.4
1,146,062	+		Sama_0946	0.42	+1.0
1,146,063	-		Sama_0946	0.42	+0.2
1,146,068	+		Sama_0946	0.42	-1.3
1,146,068	+		Sama_0946	0.42	+0.5
1,146,068	+		Sama_0946	0.42	+0.4
1,146,068	+		Sama_0946	0.42	-0.6
1,146,163	+		Sama_0946	0.51	+0.7
1,146,207	+		Sama_0946	0.55	+0.4
1,146,207	+		Sama_0946	0.55	-0.4
1,146,208	-		Sama_0946	0.55	-1.0
1,146,208	-		Sama_0946	0.55	+1.2
1,146,217	+		Sama_0946	0.56	+0.4
1,146,217	+		Sama_0946	0.56	+0.0
1,146,217	+		Sama_0946	0.56	-0.7
1,146,217	+		Sama_0946	0.56	-0.3
1,146,217	+		Sama_0946	0.56	-0.8
1,146,217	+		Sama_0946	0.56	+1.0
1,146,217	+		Sama_0946	0.56	-0.6
1,146,218	-		Sama_0946	0.56	-1.1
1,146,218	-		Sama_0946	0.56	+0.6
1,146,218	-		Sama_0946	0.56	+0.2
1,146,218	-		Sama_0946	0.56	+1.0
1,146,218	-		Sama_0946	0.56	+0.3
1,146,218	-		Sama_0946	0.56	-0.1
1,146,219	+		Sama_0946	0.56	+0.6
1,146,220	-		Sama_0946	0.56	-0.3
1,146,345	+		Sama_0946	0.67	+0.4
1,146,345	+		Sama_0946	0.67	-0.9
1,146,346	-		Sama_0946	0.67	-0.5
1,146,450	-		Sama_0946	0.76	-0.3
1,146,450	-		Sama_0946	0.76	+0.1
1,146,468	+		Sama_0946	0.78	-0.5
1,146,468	+		Sama_0946	0.78	-2.1
1,146,468	+		Sama_0946	0.78	-0.1
1,146,468	+		Sama_0946	0.78	+0.3