Strain Fitness in Shewanella oneidensis MR-1 around SO3276

Experiment: Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.06 mg/ml
3,415,105	+		SO3274	0.84	+0.2
3,415,135	+				+1.4
3,415,139	+				-0.6
3,415,202	-				-0.1
3,415,202	-				+1.3
3,415,202	-				+0.4
3,415,421	-				+0.5
3,415,474	-				-0.3
3,415,527	-		SO3275	0.12	-0.6
3,415,652	+		SO3275	0.35	-0.1
3,415,766	-		SO3275	0.55	-0.8
3,415,957	+		SO3275	0.89	-1.6
3,415,998	-				-1.0
3,416,109	+				+0.5
3,416,252	-		SO3276	0.25	-0.3
3,416,363	+		SO3276	0.37	-1.2
3,416,422	-		SO3276	0.43	+0.5
3,416,468	+		SO3276	0.48	-0.2
3,416,470	+		SO3276	0.48	-1.1
3,416,470	+		SO3276	0.48	-1.4
3,416,470	+		SO3276	0.48	+0.9
3,416,470	+		SO3276	0.48	-2.3
3,416,478	-		SO3276	0.49	-1.1
3,416,547	+		SO3276	0.56	+0.0
3,416,688	+		SO3276	0.71	-1.0
3,416,769	+		SO3276	0.80	-0.0
3,416,769	+		SO3276	0.80	-0.7
3,416,866	-				-1.0
3,416,892	+				+0.0
3,416,898	+				+1.4
3,416,898	-				+0.2
3,416,907	-				-0.4
3,416,926	-				-0.3
3,416,949	+				+0.0
3,417,102	-				+1.0
3,417,104	-				+0.2
3,417,120	+				-0.3
3,417,153	+		SO3277	0.15	-0.3
3,417,159	+		SO3277	0.16	-0.4
3,417,161	-		SO3277	0.16	-0.5
3,417,204	+		SO3277	0.24	+0.3
3,417,207	+		SO3277	0.24	-0.5
3,417,207	+		SO3277	0.24	+0.6
3,417,546	+		SO3277	0.84	+0.5
3,417,594	-				-0.9
3,417,661	+				+0.0
3,417,674	+				-0.0
3,417,750	-				-0.3
3,417,837	-				-0.9
3,417,842	-				-0.6
3,417,896	-				-0.5