Strain Fitness in Shewanella oneidensis MR-1 around SO2980

Experiment: Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.06 mg/ml
3,107,601	-		SO2978	0.67	+0.4
3,107,601	-		SO2978	0.67	+1.5
3,107,616	+		SO2978	0.68	-0.5
3,107,675	+		SO2978	0.73	-0.2
3,107,708	-		SO2978	0.76	-1.0
3,107,800	-		SO2978	0.83	+1.4
3,107,865	-		SO2978	0.89	+0.5
3,107,895	-				-3.2
3,107,909	-				-0.2
3,108,081	+		SO2979	0.14	+0.0
3,108,081	+		SO2979	0.14	-0.3
3,108,081	+		SO2979	0.14	-0.8
3,108,089	-		SO2979	0.15	-0.7
3,108,089	-		SO2979	0.15	+0.2
3,108,089	-		SO2979	0.15	-0.4
3,108,115	+		SO2979	0.19	-2.0
3,108,123	-		SO2979	0.21	-0.6
3,108,303	-		SO2979	0.50	+0.7
3,108,307	+		SO2979	0.51	-0.3
3,108,312	+		SO2979	0.52	-0.6
3,108,313	-		SO2979	0.52	-0.3
3,108,313	-		SO2979	0.52	-0.3
3,108,315	-		SO2979	0.52	+1.2
3,108,320	-		SO2979	0.53	+0.0
3,108,327	-		SO2979	0.54	-0.9
3,108,340	+		SO2979	0.57	+0.3
3,108,340	+		SO2979	0.57	-0.8
3,108,348	-		SO2979	0.58	+0.4
3,108,492	-		SO2979	0.82	+0.5
3,108,510	+		SO2979	0.85	+0.2
3,108,520	+		SO2979	0.86	-0.6
3,108,523	-		SO2979	0.87	-0.7
3,108,566	-				+0.5
3,108,586	-				+0.3
3,108,684	+		SO2980	0.15	-1.4
3,108,695	+		SO2980	0.17	-0.2
3,108,696	+		SO2980	0.17	+1.0
3,108,788	+		SO2980	0.34	-0.3
3,108,900	+		SO2980	0.53	-0.0
3,108,900	+		SO2980	0.53	-0.3
3,108,922	+		SO2980	0.57	+0.6
3,108,930	-		SO2980	0.59	-0.9
3,109,021	-		SO2980	0.75	+0.5
3,109,042	-		SO2980	0.78	+0.0
3,109,070	+		SO2980	0.83	+1.0
3,109,145	-				+0.6
3,109,145	-				-0.3
3,109,224	+		SO2981	0.10	+0.2
3,109,229	+		SO2981	0.11	-0.2
3,109,232	-		SO2981	0.11	-0.2
3,109,436	+		SO2981	0.46	-0.3
3,109,669	+		SO2981	0.86	-0.1
3,109,702	-				+1.7
3,109,750	+				-0.9
3,109,808	+		SO2982	0.13	+0.1
3,109,808	+		SO2982	0.13	+0.7
3,109,843	+		SO2982	0.20	-0.3
3,109,910	-		SO2982	0.33	+0.1
3,109,910	-		SO2982	0.33	-0.5
3,109,949	-		SO2982	0.41	+1.1
3,109,950	-		SO2982	0.41	-1.1
3,109,961	+		SO2982	0.43	+0.0
3,110,003	+		SO2982	0.51	+1.3
3,110,045	-		SO2982	0.59	+0.8
3,110,098	+		SO2982	0.69	-0.1
3,110,103	+		SO2982	0.70	-0.2
3,110,113	+		SO2982	0.72	+1.5
3,110,113	+		SO2982	0.72	+0.2
3,110,113	+		SO2982	0.72	-0.2
3,110,113	+		SO2982	0.72	+0.4
3,110,116	-		SO2982	0.73	-0.3
3,110,121	-		SO2982	0.74	+0.3
3,110,121	-		SO2982	0.74	+0.5
3,110,121	-		SO2982	0.74	+0.5
3,110,121	-		SO2982	0.74	-2.7
3,110,121	-		SO2982	0.74	+0.3
3,110,141	+		SO2982	0.78	+0.7