Strain Fitness in Shewanella oneidensis MR-1 around SO2774

Experiment: Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.06 mg/ml
2,895,530	+		SO2772	0.71	-1.6
2,895,548	+		SO2772	0.75	-0.3
2,895,548	+		SO2772	0.75	-0.2
2,895,548	+		SO2772	0.75	+0.1
2,895,556	-		SO2772	0.77	+0.0
2,895,556	-		SO2772	0.77	-0.6
2,895,588	+		SO2772	0.83	-0.1
2,895,938	-		SO2773	0.42	-0.8
2,895,992	+		SO2773	0.56	+0.5
2,896,128	-				+0.8
2,896,381	+				-1.7
2,896,392	-				-1.7
2,896,927	-	fabF-1	SO2774	0.48	-2.9
2,896,979	-	fabF-1	SO2774	0.52	-3.3
2,897,280	-	fabF-1	SO2774	0.77	-1.0
2,897,285	-	fabF-1	SO2774	0.77	-1.1
2,897,301	-	fabF-1	SO2774	0.78	-1.9
2,897,360	-	fabF-1	SO2774	0.83	+0.4
2,897,473	-				-0.4
2,897,485	-				-2.4
2,897,532	+				-1.2
2,897,600	+				-1.6
2,898,140	+				+0.7
2,898,180	-				-0.6
2,898,180	-				-1.3