Strain Fitness in Shewanella oneidensis MR-1 around SO2430

Experiment: Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.06 mg/ml
2,538,446	+	ruvB	SO2429	0.26	-3.1
2,538,619	-	ruvB	SO2429	0.43	-2.5
2,538,695	-	ruvB	SO2429	0.51	-0.3
2,539,094	-				-2.0
2,539,131	+				+0.9
2,539,233	-				+0.3
2,539,326	-				-2.4
2,539,326	-				-1.9
2,539,405	+	ruvA	SO2430	0.21	+0.7
2,539,481	-	ruvA	SO2430	0.33	-0.6
2,539,503	-	ruvA	SO2430	0.37	-0.7
2,539,584	+	ruvA	SO2430	0.50	-1.1
2,539,886	+				-0.3
2,539,891	+				-0.9
2,539,964	-	ruvC	SO2431	0.14	-3.4
2,540,395	-				-1.9
2,540,475	+				-0.7
2,540,483	-				+0.4
2,540,570	-				+1.0
2,540,855	-		SO2432	0.34	-0.3