Strain Fitness in Shewanella oneidensis MR-1 around SO2296

Experiment: Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.06 mg/ml
2,407,951	-		SO2295	0.40	-0.7
2,407,986	-		SO2295	0.43	-0.8
2,408,199	+		SO2295	0.58	-0.9
2,408,297	+		SO2295	0.65	-0.9
2,408,342	+		SO2295	0.68	+1.3
2,408,345	-		SO2295	0.69	-0.4
2,408,488	-		SO2295	0.79	+0.7
2,408,578	+		SO2295	0.86	-0.9
2,408,669	-				-0.9
2,408,820	+				+0.1
2,408,829	-				-0.4
2,408,961	-	ribE-1	SO2296	0.24	+0.3
2,409,119	-	ribE-1	SO2296	0.50	-1.6
2,409,119	-	ribE-1	SO2296	0.50	-0.4
2,409,301	+	ribE-1	SO2296	0.79	-1.2
2,409,309	-	ribE-1	SO2296	0.80	-0.7
2,409,468	+		SO2297	0.14	+0.1
2,409,503	+		SO2297	0.31	-0.2
2,409,683	-				+1.1
2,409,698	+				+0.7
2,409,698	+				+0.5
2,409,706	-				+0.2
2,409,706	-				-1.0
2,409,828	+				+1.3
2,409,842	+				+0.1
2,409,854	+				-0.3
2,409,854	+				+0.8
2,409,854	+				-0.4
2,409,867	-				+1.0
2,409,890	+				+0.7
2,409,898	-				-0.6
2,409,996	-		SO2298	0.45	-0.2
2,410,056	+		SO2298	0.71	-2.5
2,410,122	+				+0.0
2,410,173	+				-1.5
2,410,181	-				-0.3
2,410,305	-				+1.2