Strain Fitness in Shewanella oneidensis MR-1 around SO2244

Experiment: Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.06 mg/ml
2,358,266	-		SO2241	0.64	+0.6
2,358,617	-				+1.1
2,358,623	+				+1.0
2,359,195	-				+0.0
2,359,222	+				+0.0
2,359,289	+		SO2244	0.15	+1.3
2,359,350	+		SO2244	0.20	+0.9
2,359,378	-		SO2244	0.23	-0.5
2,359,641	+		SO2244	0.48	-0.7
2,359,942	-		SO2244	0.76	-0.2
2,359,987	+		SO2244	0.81	+0.8
2,360,027	+		SO2244	0.84	+0.5
2,360,091	+				+2.6
2,360,141	+				-0.3
2,360,141	+				+1.2
2,360,149	-				+0.0
2,360,195	+				+2.3
2,360,342	+				-0.9
2,360,884	-	dnaQ-1	SO2245	0.46	+1.6
2,361,161	-	dnaQ-1	SO2245	0.89	+1.3