Strain Fitness in Shewanella oneidensis MR-1 around SO2100

Experiment: Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.06 mg/ml
2,197,390	-	hoxK	SO2099	0.46	-2.2
2,197,401	+	hoxK	SO2099	0.47	+0.3
2,197,401	+	hoxK	SO2099	0.47	-0.1
2,197,401	+	hoxK	SO2099	0.47	-1.2
2,197,409	-	hoxK	SO2099	0.47	-1.9
2,197,409	-	hoxK	SO2099	0.47	+1.0
2,197,409	-	hoxK	SO2099	0.47	-0.2
2,197,409	-	hoxK	SO2099	0.47	-0.1
2,197,409	-	hoxK	SO2099	0.47	+0.4
2,197,416	+	hoxK	SO2099	0.48	+1.0
2,197,416	+	hoxK	SO2099	0.48	+0.2
2,197,416	+	hoxK	SO2099	0.48	-0.2
2,197,416	+	hoxK	SO2099	0.48	-0.7
2,197,508	+	hoxK	SO2099	0.56	-0.3
2,197,516	-	hoxK	SO2099	0.57	+1.3
2,197,775	+	hoxK	SO2099	0.80	+0.3
2,197,834	+	hoxK	SO2099	0.85	-0.3
2,197,947	-				-0.7
2,197,954	+				+1.0
2,197,996	-				+0.4
2,198,261	-				+0.2
2,198,388	+				-0.3
2,198,388	+				-0.2
2,198,506	+		SO2100	0.32	+0.4
2,198,506	+		SO2100	0.32	+1.1
2,198,681	+		SO2100	0.70	+0.3
2,198,792	-				-0.1
2,198,823	-				+0.5
2,198,894	-		SO2101	0.31	-0.1
2,199,003	-		SO2101	0.80	-0.1
2,199,313	+		SO2102	0.14	-0.5
2,199,313	+		SO2102	0.14	-0.6
2,199,313	+		SO2102	0.14	+0.5
2,199,321	-		SO2102	0.15	+0.6
2,199,321	-		SO2102	0.15	+0.3
2,199,329	+		SO2102	0.15	+0.6
2,199,345	-		SO2102	0.17	+0.3
2,199,429	-		SO2102	0.23	-0.1
2,199,484	-		SO2102	0.27	+0.8
2,199,571	-		SO2102	0.33	-0.2
2,199,710	-		SO2102	0.44	-0.5
2,199,712	+		SO2102	0.44	+0.3
2,199,730	-		SO2102	0.45	-0.6