Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2402

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,553,677	+		Psest_2400	0.86	-0.3
2,553,677	+		Psest_2400	0.86	-0.1
2,553,677	+		Psest_2400	0.86	+0.7
2,553,677	+		Psest_2400	0.86	+0.2
2,553,678	-		Psest_2400	0.86	-0.2
2,553,678	-		Psest_2400	0.86	-1.9
2,553,693	-		Psest_2400	0.88	+0.2
2,553,755	+				-0.9
2,553,755	+				+0.4
2,553,755	+				-0.8
2,553,755	+				-1.2
2,553,755	+				-0.2
2,553,755	+				+0.9
2,553,756	-				-0.2
2,553,756	-				+0.4
2,553,756	-				-0.6
2,553,756	-				+0.4
2,553,946	+		Psest_2401	0.12	+1.0
2,553,947	-		Psest_2401	0.13	-0.2
2,553,975	-		Psest_2401	0.16	+1.4
2,553,975	-		Psest_2401	0.16	+0.2
2,554,192	+		Psest_2401	0.43	-0.4
2,554,271	-		Psest_2401	0.52	+0.2
2,554,271	-		Psest_2401	0.52	-0.9
2,554,540	+		Psest_2401	0.85	+0.3
2,554,541	-		Psest_2401	0.85	-0.6
2,554,657	+				+0.8
2,554,658	-				-0.3
2,554,725	+				-2.4
2,554,726	-				-0.6
2,554,726	-				-1.3
2,554,896	-		Psest_2402	0.19	+0.2
2,554,896	-		Psest_2402	0.19	+0.1
2,554,908	-		Psest_2402	0.20	+0.2
2,555,132	+		Psest_2402	0.38	-0.3
2,555,133	-		Psest_2402	0.38	+0.4
2,555,133	-		Psest_2402	0.38	-0.8
2,555,133	-		Psest_2402	0.38	-1.0
2,555,133	-		Psest_2402	0.38	-0.8
2,555,276	+		Psest_2402	0.49	-0.2
2,555,277	-		Psest_2402	0.49	-0.6
2,555,277	-		Psest_2402	0.49	+1.2
2,555,277	-		Psest_2402	0.49	+1.2
2,555,277	-		Psest_2402	0.49	-0.2
2,555,339	+		Psest_2402	0.54	-0.9
2,555,340	-		Psest_2402	0.54	-0.5
2,555,342	-		Psest_2402	0.54	-2.8
2,555,483	+		Psest_2402	0.65	-0.2
2,555,483	+		Psest_2402	0.65	-1.8
2,555,484	-		Psest_2402	0.65	-1.4
2,555,600	+		Psest_2402	0.74	-0.2
2,555,600	+		Psest_2402	0.74	-0.8
2,555,601	-		Psest_2402	0.74	-0.8
2,555,783	+		Psest_2402	0.88	-0.8
2,555,783	+		Psest_2402	0.88	-0.3
2,555,784	-		Psest_2402	0.88	+0.2
2,555,784	-		Psest_2402	0.88	-1.3
2,555,784	-		Psest_2402	0.88	-0.3
2,555,807	+				+1.4
2,555,807	+				-0.4
2,555,808	-				-1.8
2,555,808	-				+1.0
2,555,808	-				-1.6
2,555,900	+				+0.4
2,556,001	-				+1.4
2,556,001	-				-0.4
2,556,001	-				-0.2
2,556,006	-				-1.2
2,556,034	+				-1.2
2,556,034	+				-0.6
2,556,034	+				-0.2
2,556,034	+				+2.4
2,556,034	+				-0.1
2,556,035	-				+1.4
2,556,035	-				-1.2
2,556,075	+				-1.0
2,556,075	+				+0.4
2,556,075	+				-0.2
2,556,075	+				-0.0
2,556,140	+		Psest_2403	0.12	+0.4
2,556,141	-		Psest_2403	0.12	-0.4
2,556,141	-		Psest_2403	0.12	+0.1
2,556,141	-		Psest_2403	0.12	-0.2
2,556,141	-		Psest_2403	0.12	+0.8
2,556,141	-		Psest_2403	0.12	-1.5
2,556,212	+		Psest_2403	0.16	+0.4
2,556,279	+		Psest_2403	0.21	-0.9
2,556,279	+		Psest_2403	0.21	-0.3
2,556,279	+		Psest_2403	0.21	-1.1
2,556,280	-		Psest_2403	0.21	-0.2
2,556,280	-		Psest_2403	0.21	-0.2
2,556,280	-		Psest_2403	0.21	-1.2
2,556,280	-		Psest_2403	0.21	-1.3
2,556,280	-		Psest_2403	0.21	-0.9
2,556,423	+		Psest_2403	0.31	-0.8
2,556,423	+		Psest_2403	0.31	-0.9
2,556,423	+		Psest_2403	0.31	-0.4
2,556,423	+		Psest_2403	0.31	-0.3
2,556,423	+		Psest_2403	0.31	-1.4
2,556,424	-		Psest_2403	0.31	-0.7
2,556,424	-		Psest_2403	0.31	-0.8
2,556,424	-		Psest_2403	0.31	-0.3
2,556,732	+		Psest_2403	0.51	+0.1
2,556,732	+		Psest_2403	0.51	-0.0
2,556,733	-		Psest_2403	0.51	-1.4