Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2172

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,327,819	-		Psest_2171	0.45	-0.8
2,327,819	-		Psest_2171	0.45	-0.6
2,328,179	-		Psest_2171	0.65	+0.3
2,328,179	-		Psest_2171	0.65	+1.2
2,328,206	-		Psest_2171	0.66	-1.0
2,328,206	-		Psest_2171	0.66	+0.8
2,328,206	-		Psest_2171	0.66	+1.6
2,328,222	+		Psest_2171	0.67	-1.0
2,328,222	+		Psest_2171	0.67	+0.2
2,328,223	-		Psest_2171	0.67	+0.3
2,328,223	-		Psest_2171	0.67	+0.9
2,328,283	+		Psest_2171	0.71	-1.0
2,328,309	+		Psest_2171	0.72	-0.4
2,328,310	-		Psest_2171	0.72	-0.3
2,328,319	+		Psest_2171	0.73	+1.1
2,328,430	+		Psest_2171	0.79	-2.4
2,328,451	+		Psest_2171	0.80	-2.3
2,328,451	+		Psest_2171	0.80	-0.3
2,328,452	-		Psest_2171	0.80	-0.4
2,328,452	-		Psest_2171	0.80	-1.7
2,328,452	-		Psest_2171	0.80	-0.1
2,328,505	+		Psest_2171	0.83	+1.7
2,328,505	+		Psest_2171	0.83	+0.4
2,328,505	+		Psest_2171	0.83	-1.0
2,328,505	+		Psest_2171	0.83	+0.4
2,328,505	+		Psest_2171	0.83	-1.7
2,328,505	+		Psest_2171	0.83	-0.7
2,328,505	+		Psest_2171	0.83	-0.3
2,328,506	-		Psest_2171	0.83	-2.0
2,328,506	-		Psest_2171	0.83	-1.2
2,328,510	-		Psest_2171	0.83	-0.7
2,328,510	-		Psest_2171	0.83	-1.2
2,328,510	-		Psest_2171	0.83	-0.1
2,328,510	-		Psest_2171	0.83	-0.5
2,328,510	-		Psest_2171	0.83	-0.7
2,328,647	-				-0.3
2,328,647	-				+0.4
2,328,647	-				+0.6
2,328,690	+				+0.4
2,328,691	-				+2.0
2,328,805	+				+0.4
2,328,805	+				-1.2
2,328,822	+				-1.0
2,328,822	+				-1.8
2,328,822	+				-0.5
2,328,823	-				-0.7
2,328,823	-				+1.1
2,329,099	+		Psest_2172	0.18	-1.9
2,329,099	+		Psest_2172	0.18	+0.8
2,329,099	+		Psest_2172	0.18	-0.2
2,329,099	+		Psest_2172	0.18	-0.0
2,329,100	-		Psest_2172	0.18	-0.5
2,329,100	-		Psest_2172	0.18	+0.4
2,329,100	-		Psest_2172	0.18	-1.7
2,329,100	-		Psest_2172	0.18	+0.1
2,329,100	-		Psest_2172	0.18	-0.6
2,329,100	-		Psest_2172	0.18	-0.5
2,329,414	+		Psest_2172	0.39	+0.1
2,329,414	+		Psest_2172	0.39	-1.0
2,329,414	+		Psest_2172	0.39	-0.6
2,329,415	-		Psest_2172	0.39	-0.8
2,329,415	-		Psest_2172	0.39	-0.9
2,329,415	-		Psest_2172	0.39	-2.0
2,329,415	-		Psest_2172	0.39	+1.2
2,329,603	+		Psest_2172	0.51	+1.4
2,329,604	-		Psest_2172	0.51	+1.0
2,329,604	-		Psest_2172	0.51	+1.4
2,329,604	-		Psest_2172	0.51	-0.8
2,329,604	-		Psest_2172	0.51	-0.4
2,329,672	+		Psest_2172	0.55	-0.0
2,329,787	+		Psest_2172	0.63	+0.2
2,329,788	-		Psest_2172	0.63	-0.2
2,329,810	+		Psest_2172	0.64	-1.7
2,329,810	+		Psest_2172	0.64	-0.5
2,329,810	+		Psest_2172	0.64	+0.5
2,329,810	+		Psest_2172	0.64	-1.0
2,329,810	+		Psest_2172	0.64	-0.8
2,329,810	+		Psest_2172	0.64	-0.2
2,329,810	+		Psest_2172	0.64	+1.2
2,329,811	-		Psest_2172	0.64	+0.1
2,329,811	-		Psest_2172	0.64	-1.7
2,330,011	+		Psest_2172	0.77	-0.4
2,330,011	+		Psest_2172	0.77	+0.2
2,330,011	+		Psest_2172	0.77	-0.7
2,330,011	+		Psest_2172	0.77	-0.5
2,330,011	+		Psest_2172	0.77	-1.1
2,330,012	-		Psest_2172	0.77	-0.1
2,330,012	-		Psest_2172	0.77	-1.4
2,330,012	-		Psest_2172	0.77	-1.0
2,330,012	-		Psest_2172	0.77	+0.7
2,330,012	-		Psest_2172	0.77	-1.9
2,330,012	-		Psest_2172	0.77	+0.7
2,330,012	-		Psest_2172	0.77	-0.1
2,330,012	-		Psest_2172	0.77	-1.1
2,330,071	+		Psest_2172	0.81	-2.0
2,330,072	-		Psest_2172	0.81	+1.1
2,330,072	-		Psest_2172	0.81	-1.2
2,330,360	+				-1.2
2,330,412	-				+0.3
2,330,419	+				-0.7
2,330,420	-				-0.4
2,330,420	-				-1.2
2,330,420	-				-0.2
2,330,420	-				+0.1
2,330,429	-				+0.6
2,330,429	-				+0.8
2,330,429	-				-0.4
2,330,454	+				+0.3
2,330,454	+				-1.0
2,330,454	+				-0.0
2,330,454	+				-2.0
2,330,454	+				-0.6
2,330,454	+				+0.1
2,330,454	+				+0.0
2,330,454	+				-1.6
2,330,454	+				-0.9
2,330,454	+				-0.5
2,330,455	-				+2.2
2,330,455	-				-2.0
2,330,455	-				-0.3
2,330,455	-				-1.5
2,330,474	+				+0.2
2,330,475	-				+0.4
2,330,475	-				+2.4
2,330,618	-				-0.4
2,330,618	-				-0.5
2,330,737	+		Psest_2173	0.14	-0.6
2,330,772	+		Psest_2173	0.21	+1.4
2,330,772	+		Psest_2173	0.21	-1.9
2,330,772	+		Psest_2173	0.21	-1.6
2,330,813	+		Psest_2173	0.29	-1.7
2,330,813	+		Psest_2173	0.29	+1.0
2,330,814	-		Psest_2173	0.29	-1.9
2,330,814	-		Psest_2173	0.29	-0.8
2,331,002	+		Psest_2173	0.66	-2.3
2,331,003	-		Psest_2173	0.66	-0.7
2,331,102	-		Psest_2173	0.86	+0.4
2,331,128	+				-0.2
2,331,138	+				+0.4
2,331,138	+				-0.3
2,331,170	+				-0.3
2,331,221	-				+0.7
2,331,319	+		Psest_2174	0.14	-0.4