Strain Fitness in Shewanella amazonensis SB2B around Sama_3439

Experiment: A22 0.0109375 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.0109375 mg/ml
4,068,749	+		Sama_3437	0.15	-0.2
4,068,749	+		Sama_3437	0.15	-1.0
4,068,749	+		Sama_3437	0.15	+1.0
4,068,749	+		Sama_3437	0.15	-0.2
4,068,749	+		Sama_3437	0.15	-0.0
4,068,749	+		Sama_3437	0.15	-0.2
4,068,749	+		Sama_3437	0.15	+0.2
4,068,750	-		Sama_3437	0.15	+0.4
4,068,750	-		Sama_3437	0.15	-1.0
4,068,750	-		Sama_3437	0.15	+0.1
4,068,750	-		Sama_3437	0.15	+2.2
4,068,750	-		Sama_3437	0.15	-0.2
4,068,750	-		Sama_3437	0.15	+0.1
4,068,750	-		Sama_3437	0.15	+0.1
4,068,750	-		Sama_3437	0.15	-1.9
4,068,750	-		Sama_3437	0.15	-1.0
4,068,750	-		Sama_3437	0.15	+0.0
4,068,821	+		Sama_3437	0.27	-0.4
4,068,821	+		Sama_3437	0.27	-0.5
4,068,821	+		Sama_3437	0.27	-0.1
4,068,821	+		Sama_3437	0.27	+0.1
4,068,822	-		Sama_3437	0.27	-0.1
4,068,822	-		Sama_3437	0.27	+0.4
4,068,822	-		Sama_3437	0.27	-0.6
4,068,822	-		Sama_3437	0.27	-0.0
4,068,822	-		Sama_3437	0.27	+1.5
4,068,822	-		Sama_3437	0.27	+1.2
4,068,822	-		Sama_3437	0.27	+0.6
4,068,849	-		Sama_3437	0.31	+0.1
4,068,849	-		Sama_3437	0.31	-1.9
4,068,849	-		Sama_3437	0.31	+0.1
4,068,849	-		Sama_3437	0.31	+0.2
4,068,871	-		Sama_3437	0.35	+0.6
4,068,880	-		Sama_3437	0.36	-0.3
4,068,919	-		Sama_3437	0.43	+0.1
4,068,919	-		Sama_3437	0.43	-0.4
4,068,919	-		Sama_3437	0.43	+0.5
4,068,919	-		Sama_3437	0.43	-0.2
4,068,919	-		Sama_3437	0.43	-0.1
4,068,993	-		Sama_3437	0.55	+0.3
4,069,009	+		Sama_3437	0.57	-0.9
4,069,009	+		Sama_3437	0.57	-0.4
4,069,010	-		Sama_3437	0.58	+0.4
4,069,010	-		Sama_3437	0.58	+1.0
4,069,020	+		Sama_3437	0.59	+0.1
4,069,063	+		Sama_3437	0.66	-0.1
4,069,220	+				+0.2
4,069,220	+				-0.2
4,069,221	-				+0.1
4,069,221	-				+1.2
4,069,221	-				-0.4
4,069,221	-				-1.6
4,069,221	-				+0.4
4,069,284	+				-0.1
4,069,284	+				-0.4
4,069,285	-				-0.3
4,069,378	+		Sama_3438	0.23	+0.4
4,069,378	+		Sama_3438	0.23	-0.5
4,069,379	-		Sama_3438	0.23	-0.8
4,069,379	-		Sama_3438	0.23	+0.3
4,069,379	-		Sama_3438	0.23	-0.1
4,069,379	-		Sama_3438	0.23	-1.3
4,069,379	-		Sama_3438	0.23	+0.1
4,069,515	+		Sama_3438	0.53	+0.1
4,069,515	+		Sama_3438	0.53	+0.6
4,069,516	-		Sama_3438	0.53	-0.1
4,069,516	-		Sama_3438	0.53	+1.0
4,069,536	+		Sama_3438	0.58	+0.4
4,069,536	+		Sama_3438	0.58	-0.9
4,069,536	+		Sama_3438	0.58	+0.8
4,069,536	+		Sama_3438	0.58	+0.9
4,069,574	+		Sama_3438	0.66	-0.1
4,069,574	+		Sama_3438	0.66	-0.8
4,069,575	-		Sama_3438	0.66	-0.5
4,069,575	-		Sama_3438	0.66	+1.1
4,069,575	-		Sama_3438	0.66	+0.1
4,069,575	-		Sama_3438	0.66	+1.9
4,069,669	+		Sama_3438	0.87	+0.5
4,069,669	+		Sama_3438	0.87	+0.6
4,069,669	+		Sama_3438	0.87	-1.0
4,069,669	+		Sama_3438	0.87	-1.4
4,069,669	+		Sama_3438	0.87	-0.1
4,069,669	+		Sama_3438	0.87	-0.8
4,069,669	+		Sama_3438	0.87	-0.5
4,069,669	+		Sama_3438	0.87	-0.2
4,069,669	+		Sama_3438	0.87	+0.5
4,069,669	+		Sama_3438	0.87	+0.4
4,069,669	+		Sama_3438	0.87	-1.7
4,069,669	+		Sama_3438	0.87	+0.2
4,069,669	+		Sama_3438	0.87	-0.9
4,069,670	-		Sama_3438	0.87	+1.0
4,069,670	-		Sama_3438	0.87	+1.1
4,069,670	-		Sama_3438	0.87	-1.3
4,069,670	-		Sama_3438	0.87	+1.8
4,069,677	+		Sama_3438	0.89	-0.4
4,069,678	-		Sama_3438	0.89	-0.4
4,069,679	+		Sama_3438	0.89	-1.6
4,069,679	+		Sama_3438	0.89	-0.4
4,069,679	+		Sama_3438	0.89	-0.4
4,069,680	-		Sama_3438	0.89	-0.1
4,069,680	-		Sama_3438	0.89	-0.1
4,069,680	-		Sama_3438	0.89	+0.3
4,069,680	-		Sama_3438	0.89	+0.1
4,069,699	+				-1.7
4,069,699	+				+1.6
4,069,699	+				+0.4
4,069,700	-				+0.2
4,069,737	-				+0.9
4,069,737	-				+0.2
4,069,737	-				+0.5
4,069,917	+				+0.5
4,069,917	+				+0.3
4,069,917	+				+0.1
4,069,918	-				-0.6
4,069,918	-				+0.5
4,069,918	-				-0.4
4,069,918	-				-1.3
4,069,954	+		Sama_3439	0.10	-0.2
4,069,955	-		Sama_3439	0.10	+0.3
4,069,955	-		Sama_3439	0.10	+0.0
4,069,955	-		Sama_3439	0.10	-0.5
4,069,955	-		Sama_3439	0.10	-1.0
4,069,964	+		Sama_3439	0.11	-0.5
4,069,964	+		Sama_3439	0.11	-0.1
4,069,964	+		Sama_3439	0.11	+0.4
4,069,964	+		Sama_3439	0.11	-1.5
4,069,965	-		Sama_3439	0.11	-0.3
4,070,017	+		Sama_3439	0.13	-0.1
4,070,017	+		Sama_3439	0.13	+0.3
4,070,018	-		Sama_3439	0.13	+0.7
4,070,018	-		Sama_3439	0.13	+0.1
4,070,018	-		Sama_3439	0.13	-0.3
4,070,075	+		Sama_3439	0.16	-0.7
4,070,093	+		Sama_3439	0.16	-0.4
4,070,093	+		Sama_3439	0.16	-0.5
4,070,167	+		Sama_3439	0.20	+0.2
4,070,168	-		Sama_3439	0.20	-1.8
4,070,178	+		Sama_3439	0.20	+0.2
4,070,178	+		Sama_3439	0.20	-0.5
4,070,178	+		Sama_3439	0.20	-2.3
4,070,178	+		Sama_3439	0.20	-0.2
4,070,179	-		Sama_3439	0.20	+0.8
4,070,179	-		Sama_3439	0.20	-0.4
4,070,179	-		Sama_3439	0.20	+0.2
4,070,179	-		Sama_3439	0.20	+0.1
4,070,179	-		Sama_3439	0.20	-1.1
4,070,179	-		Sama_3439	0.20	-0.5
4,070,179	-		Sama_3439	0.20	+0.3
4,070,179	-		Sama_3439	0.20	-0.9
4,070,197	+		Sama_3439	0.21	-0.6
4,070,197	+		Sama_3439	0.21	-0.4
4,070,197	+		Sama_3439	0.21	-0.5
4,070,198	-		Sama_3439	0.21	-0.6
4,070,198	-		Sama_3439	0.21	-0.1
4,070,198	-		Sama_3439	0.21	+0.9
4,070,198	-		Sama_3439	0.21	-2.4
4,070,224	+		Sama_3439	0.22	+0.6
4,070,224	+		Sama_3439	0.22	+0.1
4,070,225	-		Sama_3439	0.22	-0.4
4,070,225	-		Sama_3439	0.22	+0.3
4,070,225	-		Sama_3439	0.22	-0.1
4,070,225	-		Sama_3439	0.22	-0.4
4,070,225	-		Sama_3439	0.22	-0.1
4,070,225	-		Sama_3439	0.22	-0.3
4,070,225	-		Sama_3439	0.22	-0.8
4,070,225	-		Sama_3439	0.22	+1.6
4,070,225	-		Sama_3439	0.22	+0.1
4,070,229	+		Sama_3439	0.22	-1.6
4,070,230	-		Sama_3439	0.22	+0.5
4,070,230	-		Sama_3439	0.22	-1.0
4,070,304	-		Sama_3439	0.26	-0.8
4,070,373	+		Sama_3439	0.29	-0.2
4,070,373	+		Sama_3439	0.29	-1.2
4,070,373	+		Sama_3439	0.29	+0.2
4,070,373	+		Sama_3439	0.29	-0.2
4,070,374	-		Sama_3439	0.29	-0.6
4,070,374	-		Sama_3439	0.29	+2.0
4,070,374	-		Sama_3439	0.29	+0.2
4,070,374	-		Sama_3439	0.29	+1.2
4,070,374	-		Sama_3439	0.29	+0.3
4,070,374	-		Sama_3439	0.29	-0.4
4,070,374	-		Sama_3439	0.29	+0.0
4,070,404	+		Sama_3439	0.30	-0.5
4,070,404	+		Sama_3439	0.30	-2.8
4,070,404	+		Sama_3439	0.30	+0.4
4,070,405	-		Sama_3439	0.30	+0.1
4,070,405	-		Sama_3439	0.30	-0.2
4,070,405	-		Sama_3439	0.30	-0.9
4,070,405	-		Sama_3439	0.30	+0.8
4,070,405	-		Sama_3439	0.30	+2.2
4,070,406	+		Sama_3439	0.30	-1.5
4,070,406	+		Sama_3439	0.30	+1.0
4,070,416	+		Sama_3439	0.31	-0.8
4,070,416	+		Sama_3439	0.31	-0.2
4,070,417	-		Sama_3439	0.31	-0.4
4,070,417	-		Sama_3439	0.31	-0.1
4,070,495	+		Sama_3439	0.34	-1.2
4,070,496	-		Sama_3439	0.34	+0.1
4,070,570	+		Sama_3439	0.38	+0.5
4,070,571	-		Sama_3439	0.38	-0.6
4,070,571	-		Sama_3439	0.38	-1.3
4,070,618	+		Sama_3439	0.40	-0.7
4,070,619	-		Sama_3439	0.40	-0.7
4,070,619	-		Sama_3439	0.40	-0.4
4,070,639	+		Sama_3439	0.41	+0.6
4,070,652	+		Sama_3439	0.41	+0.2
4,070,652	+		Sama_3439	0.41	+0.1
4,070,652	+		Sama_3439	0.41	+0.4
4,070,653	-		Sama_3439	0.41	+0.2
4,070,690	+		Sama_3439	0.43	-0.5
4,070,691	-		Sama_3439	0.43	+0.6
4,070,757	+		Sama_3439	0.46	-0.3
4,070,757	+		Sama_3439	0.46	-0.9
4,070,757	+		Sama_3439	0.46	-0.8
4,070,757	+		Sama_3439	0.46	-0.9
4,070,757	+		Sama_3439	0.46	-0.9
4,070,757	+		Sama_3439	0.46	-0.4
4,070,757	+		Sama_3439	0.46	+0.2
4,070,757	+		Sama_3439	0.46	-1.7
4,070,757	+		Sama_3439	0.46	+0.7
4,070,757	+		Sama_3439	0.46	+0.1
4,070,757	+		Sama_3439	0.46	+1.8
4,070,757	+		Sama_3439	0.46	-1.6
4,070,757	+		Sama_3439	0.46	-0.2
4,070,757	+		Sama_3439	0.46	+1.6
4,070,758	-		Sama_3439	0.46	-0.7
4,070,758	-		Sama_3439	0.46	+0.6
4,070,758	-		Sama_3439	0.46	-1.1
4,070,758	-		Sama_3439	0.46	-0.1
4,070,758	-		Sama_3439	0.46	-1.4
4,070,758	-		Sama_3439	0.46	+0.6
4,070,758	-		Sama_3439	0.46	+0.1
4,070,758	-		Sama_3439	0.46	-0.1
4,070,758	-		Sama_3439	0.46	-0.5
4,070,758	-		Sama_3439	0.46	+0.6
4,070,758	-		Sama_3439	0.46	-1.1
4,070,758	-		Sama_3439	0.46	+0.2
4,070,758	-		Sama_3439	0.46	-0.9
4,070,758	-		Sama_3439	0.46	-0.7
4,070,769	+		Sama_3439	0.46	+0.5
4,070,770	-		Sama_3439	0.46	-1.4
4,070,820	-		Sama_3439	0.49	+1.2
4,070,894	+		Sama_3439	0.52	-0.6
4,071,054	+		Sama_3439	0.59	+1.6
4,071,078	+		Sama_3439	0.60	-0.7
4,071,078	+		Sama_3439	0.60	-0.1
4,071,078	+		Sama_3439	0.60	+1.9
4,071,078	+		Sama_3439	0.60	-0.4
4,071,078	+		Sama_3439	0.60	-1.0
4,071,078	+		Sama_3439	0.60	+0.2
4,071,079	-		Sama_3439	0.60	+0.2
4,071,079	-		Sama_3439	0.60	-0.6
4,071,081	+		Sama_3439	0.60	-0.7
4,071,081	+		Sama_3439	0.60	-0.2
4,071,082	-		Sama_3439	0.60	+2.6
4,071,082	-		Sama_3439	0.60	+0.7
4,071,082	-		Sama_3439	0.60	-1.1
4,071,082	-		Sama_3439	0.60	+0.4
4,071,209	+		Sama_3439	0.66	+0.8
4,071,228	-		Sama_3439	0.67	+0.9
4,071,287	-		Sama_3439	0.69	-0.2
4,071,296	-		Sama_3439	0.70	-0.8
4,071,359	+		Sama_3439	0.73	+0.2
4,071,359	+		Sama_3439	0.73	-1.0
4,071,359	+		Sama_3439	0.73	+0.3
4,071,360	-		Sama_3439	0.73	-0.1
4,071,388	+		Sama_3439	0.74	-0.3
4,071,388	+		Sama_3439	0.74	-2.2
4,071,389	-		Sama_3439	0.74	+0.5
4,071,389	-		Sama_3439	0.74	-1.5
4,071,389	-		Sama_3439	0.74	+0.8
4,071,389	-		Sama_3439	0.74	+0.1
4,071,444	+		Sama_3439	0.76	-0.8
4,071,444	+		Sama_3439	0.76	+0.4
4,071,444	+		Sama_3439	0.76	+0.2
4,071,444	+		Sama_3439	0.76	-0.4
4,071,444	+		Sama_3439	0.76	-0.9
4,071,444	+		Sama_3439	0.76	+0.3
4,071,444	+		Sama_3439	0.76	-0.5
4,071,444	+		Sama_3439	0.76	+0.6
4,071,445	-		Sama_3439	0.76	-1.1
4,071,445	-		Sama_3439	0.76	+0.2
4,071,445	-		Sama_3439	0.76	-0.3
4,071,445	-		Sama_3439	0.76	-0.9
4,071,445	-		Sama_3439	0.76	-0.2
4,071,445	-		Sama_3439	0.76	-0.6
4,071,445	-		Sama_3439	0.76	+1.1
4,071,445	-		Sama_3439	0.76	-0.6
4,071,487	-		Sama_3439	0.78	-1.7
4,071,491	+		Sama_3439	0.78	-1.1
4,071,491	+		Sama_3439	0.78	-1.1
4,071,491	+		Sama_3439	0.78	-0.8
4,071,492	-		Sama_3439	0.78	+0.1
4,071,492	-		Sama_3439	0.78	-0.5
4,071,585	+		Sama_3439	0.83	-0.1
4,071,585	+		Sama_3439	0.83	+0.6
4,071,586	-		Sama_3439	0.83	-1.6
4,071,586	-		Sama_3439	0.83	-2.5
4,071,586	-		Sama_3439	0.83	-1.8
4,071,586	-		Sama_3439	0.83	-0.6
4,071,607	+		Sama_3439	0.84	-0.2
4,071,724	+		Sama_3439	0.89	+2.2
4,071,724	+		Sama_3439	0.89	-0.3
4,071,725	-		Sama_3439	0.89	+1.2
4,071,725	-		Sama_3439	0.89	-0.5
4,071,793	-				+0.2
4,071,967	+				-0.2
4,071,968	+				+0.6
4,071,968	+				-1.4
4,071,969	-				+0.5
4,071,969	-				-0.3
4,071,976	-				+0.2
4,071,980	+				-0.3
4,071,980	+				+0.6
4,071,980	+				-0.1
4,071,980	+				-1.2
4,071,980	+				-1.0
4,071,981	-				-0.5
4,071,981	-				-0.1
4,071,981	-				-0.6
4,071,981	-				+0.4
4,071,981	-				+0.1
4,071,981	-				+0.6
4,071,990	+				+0.5
4,072,009	+				+0.3
4,072,009	+				+0.2
4,072,010	-				-1.5
4,072,051	+				+0.3
4,072,051	+				+0.1
4,072,051	+				-1.4
4,072,051	+				-1.3
4,072,051	+				-0.7
4,072,052	-				+0.0
4,072,052	-				-1.1
4,072,053	+				-1.0
4,072,053	+				-0.4
4,072,053	+				+0.1
4,072,054	-				-1.1
4,072,106	+				-1.5
4,072,106	+				-0.5
4,072,142	-		Sama_3440	0.14	-0.6
4,072,238	+		Sama_3440	0.34	+0.6
4,072,267	+		Sama_3440	0.40	-0.2
4,072,346	-		Sama_3440	0.57	-0.2
4,072,358	+		Sama_3440	0.59	-0.5
4,072,358	+		Sama_3440	0.59	-0.3
4,072,359	-		Sama_3440	0.59	-0.3
4,072,374	+		Sama_3440	0.62	+0.7
4,072,374	+		Sama_3440	0.62	-0.2
4,072,374	+		Sama_3440	0.62	-0.9
4,072,375	-		Sama_3440	0.63	+0.9
4,072,375	-		Sama_3440	0.63	-0.2
4,072,450	+		Sama_3440	0.78	-0.9
4,072,450	+		Sama_3440	0.78	-0.7
4,072,450	+		Sama_3440	0.78	-1.0
4,072,451	-		Sama_3440	0.79	-0.5
4,072,451	-		Sama_3440	0.79	+0.2
4,072,485	+		Sama_3440	0.86	-0.8
4,072,485	+		Sama_3440	0.86	-1.1
4,072,486	-		Sama_3440	0.86	+0.8
4,072,486	-		Sama_3440	0.86	-0.9
4,072,486	-		Sama_3440	0.86	-0.8
4,072,504	+		Sama_3440	0.90	-1.0
4,072,505	-				-1.5
4,072,511	+				-0.4
4,072,511	+				-1.2
4,072,512	-				-0.3
4,072,512	-				+0.4
4,072,550	+				-1.7
4,072,560	+				-0.6
4,072,560	+				+0.4
4,072,560	+				-1.7
4,072,561	-				-0.5
4,072,561	-				+0.9
4,072,564	+				-0.8
4,072,564	+				+0.7
4,072,564	+				-0.1
4,072,565	-				-0.9
4,072,565	-				+0.5
4,072,614	-		Sama_3441	0.11	+0.4
4,072,624	-		Sama_3441	0.13	-1.1
4,072,624	-		Sama_3441	0.13	-0.4
4,072,632	+		Sama_3441	0.14	-1.6
4,072,633	-		Sama_3441	0.15	+0.7
4,072,633	-		Sama_3441	0.15	-1.5
4,072,633	-		Sama_3441	0.15	-0.1
4,072,642	+		Sama_3441	0.16	-0.3
4,072,642	+		Sama_3441	0.16	+0.6
4,072,642	+		Sama_3441	0.16	+1.2
4,072,643	-		Sama_3441	0.17	-0.6
4,072,643	-		Sama_3441	0.17	-0.3
4,072,643	-		Sama_3441	0.17	-0.5
4,072,712	+		Sama_3441	0.30	-0.8
4,072,712	+		Sama_3441	0.30	+0.2
4,072,712	+		Sama_3441	0.30	-0.9
4,072,713	-		Sama_3441	0.31	-1.7
4,072,713	-		Sama_3441	0.31	-0.5
4,072,713	-		Sama_3441	0.31	-1.1
4,072,713	-		Sama_3441	0.31	-0.6
4,072,713	-		Sama_3441	0.31	+0.4
4,072,713	-		Sama_3441	0.31	-0.2
4,072,759	-		Sama_3441	0.40	+0.6
4,072,777	-		Sama_3441	0.43	-0.2
4,072,816	+		Sama_3441	0.51	+0.9
4,072,816	+		Sama_3441	0.51	-0.0
4,072,816	+		Sama_3441	0.51	+0.3
4,072,816	+		Sama_3441	0.51	-1.2
4,072,821	+		Sama_3441	0.52	+0.6
4,072,821	+		Sama_3441	0.52	+0.8
4,072,821	+		Sama_3441	0.52	+0.6
4,072,821	+		Sama_3441	0.52	-0.2
4,072,822	-		Sama_3441	0.52	+0.5
4,072,822	-		Sama_3441	0.52	-0.1
4,072,906	+		Sama_3441	0.69	-0.8
4,072,907	-		Sama_3441	0.69	-0.7