Strain Fitness in Shewanella amazonensis SB2B around Sama_3307

Experiment: A22 0.0109375 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.0109375 mg/ml
3,934,858	-				-0.0
3,934,858	-				-1.0
3,934,865	+				+0.6
3,934,876	+				+0.2
3,934,876	+				+0.1
3,934,876	+				-1.0
3,934,876	+				+0.5
3,934,876	+				-0.8
3,934,876	+				-0.4
3,934,876	+				+0.9
3,934,877	-				-0.7
3,934,877	-				-1.0
3,934,918	+				+0.0
3,934,919	-				-0.6
3,934,919	-				-0.0
3,935,040	-				+0.5
3,935,040	-				+0.1
3,935,040	-				-0.2
3,935,040	-				-0.0
3,935,040	-				-0.2
3,935,096	+				+0.4
3,935,096	+				+0.0
3,935,096	+				-0.1
3,935,097	-				-1.3
3,935,260	+				+1.0
3,935,260	+				-0.4
3,935,335	+				-0.6
3,935,407	+				+1.4
3,935,407	+				+0.6
3,935,408	-				-2.3
3,935,408	-				-1.8
3,935,426	+				-0.0
3,935,426	+				+0.2
3,935,427	-				-0.6
3,935,447	+				+0.9
3,935,457	+				+1.6
3,935,457	+				+1.4
3,935,457	+				+0.2
3,935,458	-				-0.0
3,935,458	-				-0.8
3,935,465	+				-0.3
3,935,466	-				+1.3
3,935,466	-				-0.8
3,935,500	+				+0.2
3,935,500	+				+1.6
3,935,500	+				-1.1
3,935,501	-				+0.3
3,935,501	-				-0.1
3,935,538	+				+0.4
3,935,539	-				+0.8
3,935,539	-				+0.2
3,935,543	+				-0.7
3,935,544	-				+0.1
3,935,544	-				-2.4
3,935,635	+				+1.8
3,935,635	+				-0.3
3,935,635	+				-0.1
3,935,636	-				-1.0
3,935,636	-				+0.6
3,935,636	-				+0.5
3,935,636	-				-0.0
3,935,636	-				+0.9
3,935,666	+				-1.0
3,935,688	-				+0.2
3,935,697	-				-0.5
3,935,697	-				-1.8
3,935,697	-				-0.2
3,935,709	+				+0.6
3,935,710	-				+0.5
3,935,715	+				+0.6
3,935,716	-				-1.8
3,935,740	+				+0.3
3,935,740	+				+0.6
3,935,740	+				+0.3
3,935,749	+				+0.2
3,935,750	-				+0.4
3,935,750	-				+1.2
3,935,781	+				+0.6
3,935,782	-				-1.4
3,935,782	-				-0.5
3,935,782	-				+0.2
3,935,782	-				-0.1
3,935,865	+				-0.3
3,935,917	+				-0.9
3,935,917	+				-0.4
3,935,918	-				+0.1
3,935,918	-				-0.3
3,935,920	+				-0.4
3,935,957	+				+0.1
3,935,957	+				+2.2
3,935,957	+				+0.6
3,935,957	+				-0.4
3,935,957	+				-0.0
3,935,957	+				+0.8
3,935,957	+				-1.3
3,935,957	+				+0.8
3,935,958	-				-0.6
3,935,958	-				+0.6
3,935,958	-				-0.7
3,935,958	-				-0.5
3,935,960	+		Sama_3307	0.10	+1.4
3,935,960	+		Sama_3307	0.10	-0.3
3,935,960	+		Sama_3307	0.10	+0.0
3,935,960	+		Sama_3307	0.10	-0.1
3,935,960	+		Sama_3307	0.10	+1.4
3,935,960	+		Sama_3307	0.10	-1.0
3,935,960	+		Sama_3307	0.10	+0.8
3,935,960	+		Sama_3307	0.10	-1.3
3,935,960	+		Sama_3307	0.10	+0.4
3,935,960	+		Sama_3307	0.10	-0.4
3,935,961	-		Sama_3307	0.10	+0.9
3,935,961	-		Sama_3307	0.10	+0.3
3,935,961	-		Sama_3307	0.10	-0.5
3,935,961	-		Sama_3307	0.10	+0.4
3,935,961	-		Sama_3307	0.10	-1.8
3,935,961	-		Sama_3307	0.10	-0.5
3,935,961	-		Sama_3307	0.10	+1.2
3,935,961	-		Sama_3307	0.10	-0.2
3,935,961	-		Sama_3307	0.10	+0.1
3,935,996	+		Sama_3307	0.13	+0.9
3,935,996	+		Sama_3307	0.13	-0.8
3,935,996	+		Sama_3307	0.13	+0.2
3,935,996	+		Sama_3307	0.13	+1.0
3,935,996	+		Sama_3307	0.13	+0.2
3,935,996	+		Sama_3307	0.13	-0.7
3,935,996	+		Sama_3307	0.13	-0.3
3,935,996	+		Sama_3307	0.13	-0.7
3,935,996	+		Sama_3307	0.13	-1.0
3,935,996	+		Sama_3307	0.13	+0.2
3,935,996	+		Sama_3307	0.13	+0.7
3,935,996	+		Sama_3307	0.13	+0.3
3,935,996	+		Sama_3307	0.13	-0.4
3,935,996	+		Sama_3307	0.13	-0.4
3,935,996	+		Sama_3307	0.13	+2.2
3,935,996	+		Sama_3307	0.13	-0.6
3,935,996	+		Sama_3307	0.13	-0.5
3,935,996	+		Sama_3307	0.13	+1.0
3,935,997	-		Sama_3307	0.13	+0.9
3,935,997	-		Sama_3307	0.13	+0.0
3,935,997	-		Sama_3307	0.13	+0.9
3,935,997	-		Sama_3307	0.13	+0.1
3,935,997	-		Sama_3307	0.13	+0.0
3,935,997	-		Sama_3307	0.13	-0.8
3,935,997	-		Sama_3307	0.13	-1.4
3,935,997	-		Sama_3307	0.13	-0.1
3,935,997	-		Sama_3307	0.13	-1.3
3,935,997	-		Sama_3307	0.13	-1.4
3,935,997	-		Sama_3307	0.13	+0.2
3,935,997	-		Sama_3307	0.13	+0.0
3,935,997	-		Sama_3307	0.13	+0.5
3,936,003	+		Sama_3307	0.14	-0.2
3,936,003	+		Sama_3307	0.14	-0.1
3,936,003	+		Sama_3307	0.14	-0.6
3,936,003	+		Sama_3307	0.14	-1.1
3,936,003	+		Sama_3307	0.14	+0.4
3,936,003	+		Sama_3307	0.14	-0.1
3,936,003	+		Sama_3307	0.14	+0.3
3,936,003	+		Sama_3307	0.14	+0.6
3,936,003	+		Sama_3307	0.14	-0.8
3,936,003	+		Sama_3307	0.14	-0.4
3,936,003	+		Sama_3307	0.14	-0.2
3,936,003	+		Sama_3307	0.14	+0.4
3,936,003	+		Sama_3307	0.14	-0.4
3,936,003	+		Sama_3307	0.14	+0.2
3,936,003	+		Sama_3307	0.14	+0.0
3,936,003	+		Sama_3307	0.14	-0.7
3,936,003	+		Sama_3307	0.14	+1.2
3,936,003	+		Sama_3307	0.14	-0.3
3,936,004	-		Sama_3307	0.14	+1.0
3,936,004	-		Sama_3307	0.14	-0.3
3,936,004	-		Sama_3307	0.14	+0.5
3,936,004	-		Sama_3307	0.14	+0.1
3,936,004	-		Sama_3307	0.14	+0.1
3,936,004	-		Sama_3307	0.14	-0.1
3,936,004	-		Sama_3307	0.14	-0.7
3,936,004	-		Sama_3307	0.14	+0.1
3,936,004	-		Sama_3307	0.14	-0.7
3,936,004	-		Sama_3307	0.14	-1.2
3,936,004	-		Sama_3307	0.14	-0.4
3,936,004	-		Sama_3307	0.14	+1.3
3,936,004	-		Sama_3307	0.14	+0.4
3,936,004	-		Sama_3307	0.14	+0.1
3,936,004	-		Sama_3307	0.14	-0.7
3,936,004	-		Sama_3307	0.14	-0.9
3,936,004	-		Sama_3307	0.14	-0.1
3,936,005	+		Sama_3307	0.14	-0.7
3,936,005	+		Sama_3307	0.14	-0.6
3,936,005	+		Sama_3307	0.14	-0.0
3,936,005	+		Sama_3307	0.14	+0.9
3,936,005	+		Sama_3307	0.14	-0.6
3,936,005	+		Sama_3307	0.14	-0.4
3,936,006	-		Sama_3307	0.14	-1.4
3,936,006	-		Sama_3307	0.14	+0.2
3,936,006	-		Sama_3307	0.14	-0.4
3,936,072	+		Sama_3307	0.20	+0.3
3,936,072	+		Sama_3307	0.20	-1.0
3,936,072	+		Sama_3307	0.20	-0.3
3,936,072	+		Sama_3307	0.20	-2.7
3,936,073	-		Sama_3307	0.20	-0.4
3,936,073	-		Sama_3307	0.20	+0.1
3,936,073	-		Sama_3307	0.20	-1.6
3,936,073	-		Sama_3307	0.20	-1.2
3,936,073	-		Sama_3307	0.20	+0.9
3,936,073	-		Sama_3307	0.20	+0.8
3,936,073	-		Sama_3307	0.20	-1.2
3,936,073	-		Sama_3307	0.20	-0.4
3,936,073	-		Sama_3307	0.20	+1.0
3,936,073	-		Sama_3307	0.20	-1.0
3,936,073	-		Sama_3307	0.20	-0.5
3,936,163	+		Sama_3307	0.28	-1.0
3,936,163	+		Sama_3307	0.28	-0.8
3,936,164	-		Sama_3307	0.28	-0.6
3,936,164	-		Sama_3307	0.28	+0.1
3,936,192	+		Sama_3307	0.30	+0.7
3,936,193	-		Sama_3307	0.30	-0.5
3,936,193	-		Sama_3307	0.30	-0.2
3,936,193	-		Sama_3307	0.30	+0.3
3,936,200	+		Sama_3307	0.31	+1.0
3,936,201	-		Sama_3307	0.31	+0.0
3,936,242	+		Sama_3307	0.35	+0.2
3,936,299	+		Sama_3307	0.40	+0.5
3,936,302	+		Sama_3307	0.40	+0.3
3,936,302	+		Sama_3307	0.40	+0.3
3,936,302	+		Sama_3307	0.40	-0.8
3,936,302	+		Sama_3307	0.40	-0.5
3,936,302	+		Sama_3307	0.40	+0.1
3,936,302	+		Sama_3307	0.40	+0.8
3,936,303	-		Sama_3307	0.40	-0.6
3,936,303	-		Sama_3307	0.40	+0.3
3,936,303	-		Sama_3307	0.40	+2.2
3,936,303	-		Sama_3307	0.40	+0.4
3,936,321	+		Sama_3307	0.42	-0.7
3,936,321	+		Sama_3307	0.42	-0.0
3,936,323	+		Sama_3307	0.42	-0.0
3,936,323	+		Sama_3307	0.42	-1.7
3,936,323	+		Sama_3307	0.42	+1.6
3,936,323	+		Sama_3307	0.42	+0.3
3,936,323	+		Sama_3307	0.42	-0.4
3,936,323	+		Sama_3307	0.42	+0.1
3,936,323	+		Sama_3307	0.42	-0.8
3,936,323	+		Sama_3307	0.42	-0.8
3,936,323	+		Sama_3307	0.42	+1.3
3,936,323	+		Sama_3307	0.42	-0.8
3,936,323	+		Sama_3307	0.42	-0.5
3,936,397	-		Sama_3307	0.48	-1.3
3,936,426	+		Sama_3307	0.51	+0.5
3,936,478	+		Sama_3307	0.55	-0.4
3,936,478	+		Sama_3307	0.55	-0.1
3,936,494	-		Sama_3307	0.57	+1.2
3,936,494	-		Sama_3307	0.57	+1.1
3,936,504	+		Sama_3307	0.58	+0.4
3,936,504	+		Sama_3307	0.58	+0.0
3,936,505	-		Sama_3307	0.58	+0.6
3,936,505	-		Sama_3307	0.58	+0.0
3,936,555	+		Sama_3307	0.62	-0.3
3,936,555	+		Sama_3307	0.62	-0.9
3,936,555	+		Sama_3307	0.62	+0.4
3,936,555	+		Sama_3307	0.62	-0.1
3,936,555	+		Sama_3307	0.62	-0.1
3,936,555	+		Sama_3307	0.62	+1.2
3,936,555	+		Sama_3307	0.62	-0.9
3,936,555	+		Sama_3307	0.62	-0.5
3,936,555	+		Sama_3307	0.62	+0.3
3,936,555	+		Sama_3307	0.62	-0.5
3,936,555	+		Sama_3307	0.62	+0.2
3,936,556	-		Sama_3307	0.62	+0.2
3,936,556	-		Sama_3307	0.62	-0.0
3,936,556	-		Sama_3307	0.62	-1.6
3,936,556	-		Sama_3307	0.62	-0.8
3,936,556	-		Sama_3307	0.62	+0.6
3,936,556	-		Sama_3307	0.62	+0.3
3,936,559	+		Sama_3307	0.62	+0.8
3,936,559	+		Sama_3307	0.62	+1.0
3,936,559	+		Sama_3307	0.62	+0.3
3,936,559	+		Sama_3307	0.62	+1.5
3,936,559	+		Sama_3307	0.62	-0.1
3,936,559	+		Sama_3307	0.62	-1.5
3,936,559	+		Sama_3307	0.62	-0.5
3,936,559	+		Sama_3307	0.62	-0.5
3,936,559	+		Sama_3307	0.62	-0.5
3,936,560	-		Sama_3307	0.62	+0.2
3,936,560	-		Sama_3307	0.62	+0.2
3,936,560	-		Sama_3307	0.62	-0.3
3,936,560	-		Sama_3307	0.62	-0.9
3,936,560	-		Sama_3307	0.62	-0.4
3,936,560	-		Sama_3307	0.62	+0.3
3,936,560	-		Sama_3307	0.62	+0.5
3,936,560	-		Sama_3307	0.62	+0.3
3,936,601	+		Sama_3307	0.66	-0.3
3,936,601	+		Sama_3307	0.66	-0.1
3,936,601	+		Sama_3307	0.66	+0.8
3,936,753	-		Sama_3307	0.79	-0.3
3,936,805	+		Sama_3307	0.84	-0.4
3,936,806	-		Sama_3307	0.84	+0.5
3,936,806	-		Sama_3307	0.84	-0.4
3,936,806	-		Sama_3307	0.84	-0.3
3,936,806	-		Sama_3307	0.84	-0.3
3,936,806	-		Sama_3307	0.84	-1.6
3,936,806	-		Sama_3307	0.84	+0.5
3,936,840	+		Sama_3307	0.87	-1.3
3,936,841	-		Sama_3307	0.87	+0.1
3,936,845	+		Sama_3307	0.87	+0.9
3,936,846	-		Sama_3307	0.87	+0.2
3,936,846	-		Sama_3307	0.87	+0.5
3,936,920	+				+0.3
3,936,921	-				-0.1
3,936,931	+				-0.5
3,936,931	+				-0.2
3,936,932	-				-0.5
3,936,932	-				-1.1
3,936,934	+				-0.2
3,936,935	-				-0.2
3,936,935	-				-1.0
3,936,952	+				-0.2
3,936,982	-				+0.6
3,937,010	+				-0.5
3,937,011	-				-1.0
3,937,011	-				-0.4
3,937,027	+				+0.1
3,937,027	+				+0.6
3,937,027	+				-0.3
3,937,028	-				-2.1
3,937,028	-				-0.3
3,937,028	-				-0.7
3,937,028	-				+0.0
3,937,028	-				+0.4
3,937,028	-				+0.0
3,937,033	+				+1.2
3,937,033	+				+0.0
3,937,033	+				-0.4
3,937,033	+				-0.4
3,937,033	+				-0.3
3,937,034	-				+0.1
3,937,034	-				-0.1
3,937,034	-				+0.1
3,937,034	-				+0.7
3,937,051	+				+0.6
3,937,052	-				+0.1
3,937,076	+				+0.8
3,937,076	+				-1.7
3,937,076	+				-0.2
3,937,080	+				-1.3
3,937,166	+				-0.5
3,937,166	+				-2.1
3,937,166	+				-0.4
3,937,167	-		Sama_3308	0.10	-1.9
3,937,167	-		Sama_3308	0.10	+0.5
3,937,167	-		Sama_3308	0.10	-0.1
3,937,216	+		Sama_3308	0.16	+0.2
3,937,216	+		Sama_3308	0.16	-1.5
3,937,217	-		Sama_3308	0.17	-0.2
3,937,217	-		Sama_3308	0.17	+0.6
3,937,217	-		Sama_3308	0.17	+0.6
3,937,217	-		Sama_3308	0.17	+1.1
3,937,331	+		Sama_3308	0.31	+0.1
3,937,331	+		Sama_3308	0.31	-0.0
3,937,331	+		Sama_3308	0.31	+0.7
3,937,331	+		Sama_3308	0.31	-0.3
3,937,331	+		Sama_3308	0.31	+0.2
3,937,332	-		Sama_3308	0.32	-0.1
3,937,332	-		Sama_3308	0.32	-0.5
3,937,332	-		Sama_3308	0.32	+0.0
3,937,332	-		Sama_3308	0.32	+1.2
3,937,332	-		Sama_3308	0.32	+0.3
3,937,332	-		Sama_3308	0.32	-0.1
3,937,332	-		Sama_3308	0.32	+0.2
3,937,351	+		Sama_3308	0.34	-0.2
3,937,427	+		Sama_3308	0.44	-0.8
3,937,428	-		Sama_3308	0.44	+0.5
3,937,428	-		Sama_3308	0.44	-0.1
3,937,428	-		Sama_3308	0.44	+0.2
3,937,431	+		Sama_3308	0.44	-0.9
3,937,431	+		Sama_3308	0.44	-0.1
3,937,431	+		Sama_3308	0.44	-1.0
3,937,431	+		Sama_3308	0.44	-1.2
3,937,431	+		Sama_3308	0.44	-0.4
3,937,431	+		Sama_3308	0.44	-0.1
3,937,431	+		Sama_3308	0.44	+0.5
3,937,431	+		Sama_3308	0.44	-0.6
3,937,431	+		Sama_3308	0.44	+0.6
3,937,431	+		Sama_3308	0.44	+0.6
3,937,431	+		Sama_3308	0.44	+0.6
3,937,431	+		Sama_3308	0.44	-1.7
3,937,431	+		Sama_3308	0.44	+0.5
3,937,431	+		Sama_3308	0.44	-1.1
3,937,431	+		Sama_3308	0.44	-1.0
3,937,432	-		Sama_3308	0.45	-1.3
3,937,432	-		Sama_3308	0.45	+0.9
3,937,432	-		Sama_3308	0.45	-0.1
3,937,432	-		Sama_3308	0.45	+0.8
3,937,432	-		Sama_3308	0.45	+0.7
3,937,432	-		Sama_3308	0.45	+0.5
3,937,432	-		Sama_3308	0.45	+0.2
3,937,432	-		Sama_3308	0.45	+0.0
3,937,432	-		Sama_3308	0.45	+0.2
3,937,456	-		Sama_3308	0.48	-0.2
3,937,470	+		Sama_3308	0.49	+0.6
3,937,470	+		Sama_3308	0.49	+0.2
3,937,471	-		Sama_3308	0.50	+0.3
3,937,508	-		Sama_3308	0.54	-0.5
3,937,508	-		Sama_3308	0.54	-0.6
3,937,547	+		Sama_3308	0.60	-0.3
3,937,608	+		Sama_3308	0.67	+0.7
3,937,674	+		Sama_3308	0.76	+0.2
3,937,675	-		Sama_3308	0.76	+0.6
3,937,675	-		Sama_3308	0.76	-0.4
3,937,675	-		Sama_3308	0.76	+0.4
3,937,675	-		Sama_3308	0.76	-1.3
3,937,687	+		Sama_3308	0.78	+1.3
3,937,687	+		Sama_3308	0.78	-0.2
3,937,687	+		Sama_3308	0.78	+0.6
3,937,733	+		Sama_3308	0.84	-0.7
3,937,734	-		Sama_3308	0.84	-1.0
3,937,770	+		Sama_3308	0.89	-0.5
3,937,771	-		Sama_3308	0.89	+0.9
3,937,800	+				-1.3
3,937,856	-				-0.8
3,937,867	+				+0.1
3,937,867	+				-0.4
3,937,868	-				-0.6
3,937,868	-				-1.0
3,937,868	-				-0.6
3,937,930	+				-0.9
3,937,931	-				-0.5
3,937,931	-				-0.1