Strain Fitness in Shewanella amazonensis SB2B around Sama_2338

Experiment: A22 0.0109375 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.0109375 mg/ml
2,804,414	+		Sama_2337	0.64	-0.7
2,804,415	-		Sama_2337	0.64	-0.9
2,804,444	+		Sama_2337	0.65	-0.3
2,804,457	+		Sama_2337	0.66	-0.4
2,804,460	+		Sama_2337	0.66	-1.2
2,804,470	+		Sama_2337	0.66	-0.5
2,804,494	+		Sama_2337	0.67	+1.3
2,804,494	+		Sama_2337	0.67	+0.2
2,804,494	+		Sama_2337	0.67	-1.3
2,804,494	+		Sama_2337	0.67	-0.8
2,804,494	+		Sama_2337	0.67	+0.0
2,804,495	-		Sama_2337	0.67	-0.2
2,804,531	-		Sama_2337	0.69	-0.3
2,804,641	+		Sama_2337	0.73	-0.1
2,804,641	+		Sama_2337	0.73	-0.6
2,804,718	+		Sama_2337	0.76	-0.4
2,804,762	-		Sama_2337	0.78	-1.2
2,804,852	+		Sama_2337	0.82	-0.6
2,804,869	+		Sama_2337	0.83	+0.6
2,804,869	+		Sama_2337	0.83	+1.0
2,804,869	+		Sama_2337	0.83	-2.2
2,804,869	+		Sama_2337	0.83	-0.8
2,804,869	+		Sama_2337	0.83	+0.6
2,804,869	+		Sama_2337	0.83	-0.8
2,804,893	-		Sama_2337	0.83	+0.7
2,804,917	-		Sama_2337	0.84	+1.9
2,804,944	+		Sama_2337	0.86	-1.1
2,805,051	+		Sama_2337	0.90	-0.3
2,805,052	-		Sama_2337	0.90	-0.2
2,805,063	+				-0.8
2,805,063	+				-0.3
2,805,063	+				-0.8
2,805,064	-				+0.0
2,805,064	-				-0.1
2,805,064	-				+0.2
2,805,066	+				-0.7
2,805,089	+				+0.2
2,805,089	+				-0.8
2,805,089	+				-0.1
2,805,089	+				-0.3
2,805,105	+				-0.5
2,805,105	+				+0.7
2,805,126	+				-0.5
2,805,126	+				-0.1
2,805,127	-				+0.3
2,805,136	-				-0.4
2,805,143	+				-1.6
2,805,143	+				-0.1
2,805,143	+				-0.3
2,805,143	+				-0.2
2,805,143	+				-0.7
2,805,143	+				+1.1
2,805,143	+				-1.2
2,805,143	+				+2.2
2,805,144	-				-1.7
2,805,147	+				+0.8
2,805,189	-				-1.4
2,805,189	-				+0.8
2,805,189	-				+0.6
2,805,276	+				+0.7
2,805,291	+				-0.6
2,805,300	+				+0.6
2,805,337	-				+0.2
2,805,338	+				-0.6
2,805,339	-				-1.0
2,805,355	-				-1.0
2,805,355	-				-0.3
2,805,490	+		Sama_2338	0.19	-0.7
2,805,490	+		Sama_2338	0.19	-0.1
2,805,490	+		Sama_2338	0.19	-1.7
2,805,491	-		Sama_2338	0.19	+0.2
2,805,491	-		Sama_2338	0.19	-0.4
2,805,495	-		Sama_2338	0.20	-0.5
2,805,508	+		Sama_2338	0.23	-1.6
2,805,509	-		Sama_2338	0.23	-0.4
2,805,547	+		Sama_2338	0.31	-0.3
2,805,547	+		Sama_2338	0.31	+0.6
2,805,717	-		Sama_2338	0.66	+0.2
2,805,725	+		Sama_2338	0.68	-0.8
2,805,725	+		Sama_2338	0.68	+0.2
2,805,726	-		Sama_2338	0.68	+0.2
2,805,759	+		Sama_2338	0.75	-1.7
2,805,759	+		Sama_2338	0.75	+1.0
2,805,876	-				+0.0
2,805,878	+				+0.7
2,805,882	+				-1.4
2,805,883	-				-0.6
2,805,932	+				+1.1
2,805,959	-				-0.8
2,806,001	+		Sama_2339	0.12	+0.7
2,806,003	+		Sama_2339	0.13	+0.6
2,806,041	+		Sama_2339	0.20	-0.1
2,806,041	+		Sama_2339	0.20	+0.4
2,806,042	-		Sama_2339	0.20	+0.7
2,806,042	-		Sama_2339	0.20	+0.1
2,806,042	-		Sama_2339	0.20	+1.2
2,806,087	+		Sama_2339	0.28	-0.4
2,806,087	+		Sama_2339	0.28	-1.6
2,806,089	+		Sama_2339	0.28	-0.3
2,806,090	-		Sama_2339	0.28	-0.8
2,806,104	+		Sama_2339	0.31	-0.7
2,806,105	-		Sama_2339	0.31	-1.1
2,806,109	-		Sama_2339	0.32	-1.4
2,806,109	-		Sama_2339	0.32	+0.5
2,806,187	+		Sama_2339	0.46	+0.2
2,806,217	+		Sama_2339	0.51	+0.0
2,806,217	+		Sama_2339	0.51	+0.1
2,806,217	+		Sama_2339	0.51	-1.1
2,806,286	+		Sama_2339	0.64	-0.1
2,806,287	-		Sama_2339	0.64	+1.7
2,806,287	-		Sama_2339	0.64	+1.7
2,806,287	-		Sama_2339	0.64	-2.3
2,806,287	-		Sama_2339	0.64	+0.3
2,806,385	+		Sama_2339	0.82	+0.5
2,806,385	+		Sama_2339	0.82	+0.2
2,806,386	-		Sama_2339	0.82	+0.6
2,806,386	-		Sama_2339	0.82	+0.7
2,806,390	+		Sama_2339	0.83	+0.7
2,806,390	+		Sama_2339	0.83	-1.7
2,806,390	+		Sama_2339	0.83	-0.9
2,806,390	+		Sama_2339	0.83	-0.1
2,806,390	+		Sama_2339	0.83	-0.5
2,806,391	-		Sama_2339	0.83	+0.2
2,806,391	-		Sama_2339	0.83	-0.6
2,806,391	-		Sama_2339	0.83	-1.1
2,806,391	-		Sama_2339	0.83	-0.2
2,806,391	-		Sama_2339	0.83	+0.7
2,806,460	+				-0.7
2,806,461	-				-0.8
2,806,560	-				-1.4
2,806,569	+				-1.7
2,806,569	+				+0.9
2,806,570	-				+1.7
2,806,570	-				-0.8
2,806,590	+				-0.8
2,806,692	+		Sama_2340	0.10	-1.6
2,806,692	+		Sama_2340	0.10	-0.2
2,806,692	+		Sama_2340	0.10	+0.4
2,806,693	-		Sama_2340	0.10	-0.6
2,806,693	-		Sama_2340	0.10	+0.5
2,806,693	-		Sama_2340	0.10	-0.6
2,806,697	-		Sama_2340	0.11	+0.2
2,806,697	-		Sama_2340	0.11	+0.6
2,806,697	-		Sama_2340	0.11	-1.0
2,806,697	-		Sama_2340	0.11	-1.1
2,806,707	-		Sama_2340	0.12	-0.2
2,806,849	-		Sama_2340	0.26	-0.8
2,806,849	-		Sama_2340	0.26	+0.4
2,806,853	-		Sama_2340	0.26	-1.1
2,806,853	-		Sama_2340	0.26	-2.8