Strain Fitness in Shewanella amazonensis SB2B around Sama_1859

Experiment: A22 0.0109375 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.0109375 mg/ml
2,261,281	+		Sama_1857	0.23	-0.2
2,261,290	+		Sama_1857	0.27	-0.4
2,261,291	-		Sama_1857	0.28	-0.8
2,261,291	-		Sama_1857	0.28	-0.6
2,261,291	-		Sama_1857	0.28	+0.3
2,261,291	-		Sama_1857	0.28	-0.6
2,261,302	+		Sama_1857	0.33	+0.3
2,261,303	-		Sama_1857	0.34	-1.3
2,261,315	+		Sama_1857	0.40	+0.3
2,261,315	+		Sama_1857	0.40	-0.2
2,261,316	-		Sama_1857	0.40	+0.0
2,261,316	-		Sama_1857	0.40	-1.4
2,261,316	-		Sama_1857	0.40	-0.2
2,261,369	-		Sama_1857	0.66	-0.7
2,261,428	+				-1.1
2,261,623	-		Sama_1858	0.25	+1.2
2,261,623	-		Sama_1858	0.25	+0.6
2,261,748	+		Sama_1858	0.42	+1.3
2,261,749	-		Sama_1858	0.42	-0.3
2,261,775	-		Sama_1858	0.46	-0.6
2,261,784	+		Sama_1858	0.47	+0.5
2,261,848	+		Sama_1858	0.55	-1.4
2,261,849	-		Sama_1858	0.56	+0.7
2,261,862	+		Sama_1858	0.57	+0.4
2,261,863	-		Sama_1858	0.57	-1.3
2,261,874	-		Sama_1858	0.59	+0.2
2,261,888	-		Sama_1858	0.61	+0.3
2,261,888	-		Sama_1858	0.61	+1.0
2,261,983	-		Sama_1858	0.73	-0.2
2,262,016	+		Sama_1858	0.78	-0.2
2,262,016	+		Sama_1858	0.78	-0.4
2,262,163	-				+0.2
2,262,254	+				+0.2
2,262,254	+				-1.0
2,262,255	-				-0.6
2,262,255	-				+0.7
2,262,255	-				-0.8
2,262,312	-				+0.0
2,262,344	-		Sama_1859	0.11	-0.1
2,262,344	-		Sama_1859	0.11	-0.7
2,262,344	-		Sama_1859	0.11	-0.4
2,262,425	-		Sama_1859	0.16	-0.6
2,262,442	-		Sama_1859	0.17	+0.2
2,262,442	-		Sama_1859	0.17	-0.2
2,262,545	+		Sama_1859	0.24	+0.9
2,262,545	+		Sama_1859	0.24	-1.6
2,262,545	+		Sama_1859	0.24	+1.3
2,262,545	+		Sama_1859	0.24	-0.6
2,262,546	-		Sama_1859	0.24	+0.3
2,262,546	-		Sama_1859	0.24	+0.9
2,262,546	-		Sama_1859	0.24	+0.3
2,262,546	-		Sama_1859	0.24	-0.4
2,262,546	-		Sama_1859	0.24	-0.6
2,262,546	-		Sama_1859	0.24	+0.0
2,262,546	-		Sama_1859	0.24	+0.4
2,262,546	-		Sama_1859	0.24	-0.6
2,262,546	-		Sama_1859	0.24	+1.0
2,262,547	+		Sama_1859	0.24	-0.4
2,262,548	-		Sama_1859	0.24	+1.2
2,262,613	+		Sama_1859	0.28	-0.2
2,262,613	+		Sama_1859	0.28	-0.2
2,262,613	+		Sama_1859	0.28	+0.6
2,262,751	+		Sama_1859	0.37	+0.6
2,262,752	-		Sama_1859	0.37	+0.3
2,262,752	-		Sama_1859	0.37	+0.7
2,262,843	-		Sama_1859	0.42	+0.6
2,262,917	+		Sama_1859	0.47	+0.9
2,262,918	-		Sama_1859	0.47	-0.6
2,262,947	+		Sama_1859	0.49	+0.0
2,262,947	+		Sama_1859	0.49	-0.3
2,262,948	-		Sama_1859	0.49	+0.5
2,262,948	-		Sama_1859	0.49	+0.2
2,262,948	-		Sama_1859	0.49	-1.7
2,262,948	-		Sama_1859	0.49	-0.1
2,262,951	+		Sama_1859	0.49	+0.8
2,262,951	+		Sama_1859	0.49	+0.2
2,262,952	-		Sama_1859	0.49	-0.1
2,262,952	-		Sama_1859	0.49	+0.3
2,263,112	-		Sama_1859	0.60	-0.2
2,263,117	+		Sama_1859	0.60	-1.2
2,263,118	-		Sama_1859	0.60	+1.6
2,263,118	-		Sama_1859	0.60	-0.3
2,263,118	-		Sama_1859	0.60	+0.4
2,263,118	-		Sama_1859	0.60	+0.3
2,263,148	-		Sama_1859	0.62	-0.3
2,263,212	-		Sama_1859	0.66	-1.6
2,263,262	-		Sama_1859	0.69	-1.0
2,263,295	-		Sama_1859	0.71	-2.3
2,263,295	-		Sama_1859	0.71	+0.3
2,263,295	-		Sama_1859	0.71	+1.6
2,263,363	+		Sama_1859	0.75	+0.3
2,263,363	+		Sama_1859	0.75	-0.3
2,263,364	-		Sama_1859	0.75	+0.0
2,263,406	-		Sama_1859	0.78	-1.2
2,263,420	+		Sama_1859	0.79	-0.3
2,263,497	-		Sama_1859	0.84	-0.4
2,263,529	+		Sama_1859	0.86	-1.7
2,263,723	+				+0.0
2,263,724	-				-0.8
2,263,724	-				+0.4
2,263,752	+				-0.8
2,263,752	+				+0.8
2,263,752	+				-1.8
2,263,752	+				+0.6
2,263,753	-				-0.4
2,263,753	-				-0.3
2,263,864	-				+0.6
2,263,881	+				-0.5
2,263,882	-				-0.3
2,263,882	-				-0.1
2,263,882	-				-0.1
2,263,913	+				-2.1
2,263,913	+				-0.1
2,263,960	-		Sama_1860	0.10	-1.8
2,263,967	+		Sama_1860	0.11	+0.4
2,263,967	+		Sama_1860	0.11	+0.6
2,263,967	+		Sama_1860	0.11	+0.7
2,263,967	+		Sama_1860	0.11	+0.0
2,263,967	+		Sama_1860	0.11	-0.8
2,264,101	-		Sama_1860	0.18	+0.0
2,264,101	-		Sama_1860	0.18	+0.4
2,264,208	+		Sama_1860	0.23	-0.1
2,264,209	-		Sama_1860	0.23	-0.5
2,264,215	+		Sama_1860	0.23	+0.3
2,264,216	-		Sama_1860	0.23	+1.3
2,264,216	-		Sama_1860	0.23	+0.9
2,264,274	+		Sama_1860	0.26	-0.6
2,264,274	+		Sama_1860	0.26	+0.3
2,264,275	-		Sama_1860	0.26	+0.0
2,264,295	+		Sama_1860	0.27	+0.7
2,264,340	+		Sama_1860	0.30	-0.3
2,264,341	-		Sama_1860	0.30	+0.8
2,264,379	+		Sama_1860	0.31	-0.1
2,264,379	+		Sama_1860	0.31	-1.2
2,264,379	+		Sama_1860	0.31	-1.9
2,264,481	+		Sama_1860	0.37	+1.0
2,264,601	+		Sama_1860	0.43	-0.4
2,264,601	+		Sama_1860	0.43	-0.7
2,264,602	-		Sama_1860	0.43	-0.6
2,264,641	-		Sama_1860	0.45	+1.1
2,264,641	-		Sama_1860	0.45	+0.6
2,264,641	-		Sama_1860	0.45	-1.7
2,264,666	+		Sama_1860	0.46	+0.4
2,264,666	+		Sama_1860	0.46	+0.0
2,264,667	-		Sama_1860	0.46	-0.9
2,264,667	-		Sama_1860	0.46	+1.0
2,264,705	+		Sama_1860	0.48	+1.6
2,264,705	+		Sama_1860	0.48	-0.2
2,264,706	-		Sama_1860	0.48	-0.6
2,264,739	+		Sama_1860	0.50	-0.8
2,264,740	-		Sama_1860	0.50	+0.0