Strain Fitness in Shewanella amazonensis SB2B around Sama_1634

Experiment: A22 0.0109375 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.0109375 mg/ml
2,000,160	+		Sama_1633	0.36	+0.0
2,000,161	-		Sama_1633	0.37	-1.2
2,000,161	-		Sama_1633	0.37	-0.9
2,000,166	-		Sama_1633	0.37	+0.1
2,000,200	+		Sama_1633	0.41	+0.8
2,000,200	+		Sama_1633	0.41	-1.3
2,000,200	+		Sama_1633	0.41	-1.1
2,000,350	+		Sama_1633	0.57	-0.6
2,000,350	+		Sama_1633	0.57	+0.1
2,000,355	+		Sama_1633	0.58	+0.0
2,000,406	+		Sama_1633	0.63	+0.1
2,000,406	+		Sama_1633	0.63	+0.6
2,000,455	+		Sama_1633	0.69	+0.4
2,000,455	+		Sama_1633	0.69	+0.0
2,000,495	+		Sama_1633	0.73	-1.1
2,000,496	-		Sama_1633	0.73	-1.7
2,000,496	-		Sama_1633	0.73	-1.2
2,000,501	-		Sama_1633	0.74	-0.5
2,000,541	+		Sama_1633	0.78	+1.9
2,000,541	+		Sama_1633	0.78	-0.5
2,000,653	+				-0.3
2,000,659	+				-0.8
2,000,659	+				+0.5
2,000,659	+				-0.5
2,000,659	+				-0.8
2,000,659	+				-0.7
2,000,660	-				+0.3
2,000,660	-				-1.7
2,000,660	-				+0.7
2,000,660	-				-1.2
2,000,678	+				+0.8
2,000,679	-				+0.6
2,000,829	-				-1.7
2,000,829	-				-1.3
2,000,854	+				-0.7
2,000,962	-				+0.3
2,001,093	-				-0.7
2,001,107	+				-0.7
2,001,108	-				-0.4
2,001,109	+				-1.7
2,001,110	-				+0.9
2,001,110	-				-0.5
2,001,110	-				-0.2
2,001,118	+				-1.9
2,001,139	-				+0.3
2,001,222	+		Sama_1634	0.19	-0.6
2,001,222	+		Sama_1634	0.19	-0.7
2,001,222	+		Sama_1634	0.19	+0.0
2,001,222	+		Sama_1634	0.19	+1.6
2,001,284	+		Sama_1634	0.35	-0.9
2,001,284	+		Sama_1634	0.35	+0.2
2,001,346	+		Sama_1634	0.50	-1.9
2,001,384	+		Sama_1634	0.59	-0.4
2,001,403	+		Sama_1634	0.64	+0.0
2,001,407	+		Sama_1634	0.65	-0.4
2,001,407	+		Sama_1634	0.65	+0.3
2,001,446	+		Sama_1634	0.75	-0.7
2,001,450	+		Sama_1634	0.76	-1.2
2,001,450	+		Sama_1634	0.76	-0.9
2,001,648	-				-0.2
2,001,988	+				-1.0
2,001,989	-				-0.7
2,001,991	-				+0.4
2,002,015	+				+0.4
2,002,090	+				+1.3
2,002,243	+				+0.5
2,002,243	+				+1.8
2,002,326	-				+0.2
2,002,352	-				+0.0
2,002,405	+				+0.6