Strain Fitness in Shewanella amazonensis SB2B around Sama_1336

Experiment: A22 0.0109375 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.0109375 mg/ml
1,626,784	+				-2.6
1,626,785	-				-0.8
1,626,803	-				-0.4
1,627,371	-				-0.1
1,627,395	-				-0.6
1,627,395	-				-0.3
1,627,395	-				-0.1
1,627,570	-				-0.9
1,627,578	-				-0.3
1,627,637	-		Sama_1336	0.10	-0.0
1,627,637	-		Sama_1336	0.10	-0.5
1,627,640	-		Sama_1336	0.10	+0.0
1,627,640	-		Sama_1336	0.10	+0.1
1,627,640	-		Sama_1336	0.10	-1.0
1,627,640	-		Sama_1336	0.10	+0.0
1,627,675	+		Sama_1336	0.12	+0.3
1,627,675	+		Sama_1336	0.12	-0.6
1,627,675	+		Sama_1336	0.12	+0.3
1,627,675	+		Sama_1336	0.12	+0.7
1,627,675	+		Sama_1336	0.12	+0.7
1,627,676	-		Sama_1336	0.12	+0.9
1,627,676	-		Sama_1336	0.12	+0.1
1,627,676	-		Sama_1336	0.12	+0.1
1,627,676	-		Sama_1336	0.12	+0.9
1,627,676	-		Sama_1336	0.12	-1.7
1,627,676	-		Sama_1336	0.12	+1.1
1,627,676	-		Sama_1336	0.12	-0.9
1,627,679	+		Sama_1336	0.12	-1.4
1,627,679	+		Sama_1336	0.12	+0.4
1,627,679	+		Sama_1336	0.12	-1.1
1,627,679	+		Sama_1336	0.12	-0.6
1,627,679	+		Sama_1336	0.12	+0.5
1,627,679	-		Sama_1336	0.12	-1.0
1,627,679	+		Sama_1336	0.12	-0.1
1,627,680	-		Sama_1336	0.12	-1.4
1,627,680	-		Sama_1336	0.12	-0.1
1,627,680	-		Sama_1336	0.12	+0.4
1,627,680	-		Sama_1336	0.12	+0.7
1,627,680	-		Sama_1336	0.12	-0.9
1,627,680	-		Sama_1336	0.12	+2.0
1,627,680	-		Sama_1336	0.12	-1.3
1,627,680	-		Sama_1336	0.12	+0.3
1,627,680	-		Sama_1336	0.12	-0.9
1,627,680	-		Sama_1336	0.12	-0.1
1,627,680	-		Sama_1336	0.12	+0.6
1,627,681	+		Sama_1336	0.12	-0.4
1,627,681	+		Sama_1336	0.12	-0.7
1,627,681	+		Sama_1336	0.12	+1.9
1,627,681	+		Sama_1336	0.12	-0.6
1,627,681	+		Sama_1336	0.12	-0.4
1,627,681	+		Sama_1336	0.12	-1.1
1,627,681	+		Sama_1336	0.12	-0.6
1,627,681	+		Sama_1336	0.12	-0.9
1,627,681	+		Sama_1336	0.12	+0.5
1,627,681	+		Sama_1336	0.12	+1.2
1,627,681	+		Sama_1336	0.12	+0.0
1,627,681	+		Sama_1336	0.12	-0.2
1,627,681	+		Sama_1336	0.12	-2.7
1,627,681	+		Sama_1336	0.12	-1.3
1,627,681	+		Sama_1336	0.12	+0.1
1,627,681	+		Sama_1336	0.12	-1.0
1,627,681	+		Sama_1336	0.12	-2.2
1,627,681	+		Sama_1336	0.12	-2.1
1,627,681	+		Sama_1336	0.12	+1.1
1,627,681	+		Sama_1336	0.12	-1.1
1,627,681	+		Sama_1336	0.12	+0.9
1,627,681	+		Sama_1336	0.12	-0.7
1,627,681	+		Sama_1336	0.12	-0.2
1,627,681	+		Sama_1336	0.12	+0.1
1,627,682	-		Sama_1336	0.12	-0.2
1,627,682	-		Sama_1336	0.12	-1.2
1,627,682	-		Sama_1336	0.12	+1.7
1,627,682	-		Sama_1336	0.12	-0.0
1,627,682	-		Sama_1336	0.12	-1.5
1,627,682	-		Sama_1336	0.12	+0.7
1,627,682	-		Sama_1336	0.12	+0.3
1,627,682	-		Sama_1336	0.12	-0.3
1,627,682	-		Sama_1336	0.12	+0.4
1,627,682	-		Sama_1336	0.12	+0.5
1,627,682	-		Sama_1336	0.12	-0.9
1,627,682	-		Sama_1336	0.12	-1.4
1,627,682	-		Sama_1336	0.12	-1.3
1,627,682	-		Sama_1336	0.12	+0.1
1,627,682	-		Sama_1336	0.12	+0.4
1,627,682	-		Sama_1336	0.12	+0.9
1,627,682	-		Sama_1336	0.12	+1.0
1,627,682	-		Sama_1336	0.12	-0.9
1,627,682	-		Sama_1336	0.12	+0.1
1,627,682	-		Sama_1336	0.12	-0.6
1,627,682	-		Sama_1336	0.12	+0.9
1,627,682	-		Sama_1336	0.12	-1.1
1,627,682	-		Sama_1336	0.12	-0.3
1,627,682	-		Sama_1336	0.12	+0.3
1,627,682	-		Sama_1336	0.12	+1.3
1,627,702	+		Sama_1336	0.13	+0.1
1,627,724	+		Sama_1336	0.14	-1.2
1,627,843	-		Sama_1336	0.19	+0.3
1,627,849	+		Sama_1336	0.19	-0.5
1,627,924	+		Sama_1336	0.23	-0.3
1,627,927	+		Sama_1336	0.23	+1.7
1,627,928	-		Sama_1336	0.23	-0.1
1,627,928	-		Sama_1336	0.23	-0.7
1,627,928	-		Sama_1336	0.23	-0.9
1,628,011	+		Sama_1336	0.27	+0.0
1,628,011	+		Sama_1336	0.27	+0.2
1,628,011	+		Sama_1336	0.27	-0.8
1,628,011	+		Sama_1336	0.27	-0.3
1,628,011	+		Sama_1336	0.27	-0.7
1,628,011	+		Sama_1336	0.27	+1.2
1,628,011	+		Sama_1336	0.27	+0.3
1,628,012	-		Sama_1336	0.27	-0.5
1,628,012	-		Sama_1336	0.27	+1.7
1,628,012	-		Sama_1336	0.27	-0.1
1,628,012	-		Sama_1336	0.27	-0.0
1,628,081	+		Sama_1336	0.30	+1.0
1,628,081	+		Sama_1336	0.30	-0.3
1,628,081	+		Sama_1336	0.30	-1.6
1,628,081	+		Sama_1336	0.30	-0.1
1,628,081	+		Sama_1336	0.30	+1.7
1,628,081	+		Sama_1336	0.30	+0.5
1,628,081	+		Sama_1336	0.30	-2.1
1,628,081	+		Sama_1336	0.30	-0.9
1,628,081	+		Sama_1336	0.30	+0.5
1,628,081	+		Sama_1336	0.30	+0.7
1,628,081	+		Sama_1336	0.30	+0.6
1,628,081	+		Sama_1336	0.30	-0.2
1,628,081	+		Sama_1336	0.30	-2.0
1,628,081	+		Sama_1336	0.30	+0.1
1,628,081	+		Sama_1336	0.30	+0.3
1,628,081	+		Sama_1336	0.30	+0.5
1,628,081	+		Sama_1336	0.30	-0.4
1,628,082	-		Sama_1336	0.30	-0.0
1,628,082	-		Sama_1336	0.30	-1.4
1,628,082	-		Sama_1336	0.30	+2.3
1,628,082	-		Sama_1336	0.30	+1.7
1,628,082	-		Sama_1336	0.30	-0.9
1,628,082	-		Sama_1336	0.30	-0.6
1,628,082	-		Sama_1336	0.30	-0.4
1,628,082	-		Sama_1336	0.30	-1.1
1,628,082	-		Sama_1336	0.30	-0.3
1,628,082	-		Sama_1336	0.30	-0.3
1,628,082	-		Sama_1336	0.30	-0.4
1,628,082	-		Sama_1336	0.30	-1.0
1,628,082	-		Sama_1336	0.30	+0.3
1,628,159	+		Sama_1336	0.33	-1.4
1,628,160	-		Sama_1336	0.33	+0.6
1,628,179	+		Sama_1336	0.34	-0.0
1,628,180	-		Sama_1336	0.34	-0.0
1,628,205	+		Sama_1336	0.35	-0.1
1,628,205	+		Sama_1336	0.35	+0.1
1,628,205	+		Sama_1336	0.35	+0.2
1,628,206	-		Sama_1336	0.35	-0.5
1,628,206	-		Sama_1336	0.35	-1.4
1,628,206	-		Sama_1336	0.35	-0.2
1,628,206	-		Sama_1336	0.35	-1.2
1,628,206	-		Sama_1336	0.35	-0.5
1,628,206	-		Sama_1336	0.35	+0.7
1,628,250	-		Sama_1336	0.37	+0.7
1,628,320	-		Sama_1336	0.40	-0.9
1,628,402	+		Sama_1336	0.44	-2.0
1,628,402	+		Sama_1336	0.44	-1.4
1,628,402	+		Sama_1336	0.44	+0.6
1,628,403	-		Sama_1336	0.44	+0.5
1,628,403	-		Sama_1336	0.44	-0.5
1,628,403	-		Sama_1336	0.44	+0.7
1,628,403	-		Sama_1336	0.44	-2.3
1,628,407	+		Sama_1336	0.44	-0.3
1,628,407	+		Sama_1336	0.44	-0.4
1,628,407	+		Sama_1336	0.44	-0.2
1,628,407	+		Sama_1336	0.44	-1.0
1,628,407	+		Sama_1336	0.44	-1.3
1,628,408	-		Sama_1336	0.44	-0.2
1,628,414	-		Sama_1336	0.44	+0.7
1,628,466	+		Sama_1336	0.46	+1.9
1,628,466	+		Sama_1336	0.46	+0.3
1,628,505	-		Sama_1336	0.48	+0.4
1,628,519	-		Sama_1336	0.49	+1.3
1,628,555	+		Sama_1336	0.50	-1.7
1,628,555	+		Sama_1336	0.50	-0.9
1,628,567	+		Sama_1336	0.51	+0.7
1,628,567	+		Sama_1336	0.51	-0.7
1,628,679	-		Sama_1336	0.56	+0.1
1,628,720	+		Sama_1336	0.57	-1.1
1,628,720	+		Sama_1336	0.57	+0.1
1,628,720	+		Sama_1336	0.57	+0.7
1,628,720	+		Sama_1336	0.57	+0.4
1,628,720	+		Sama_1336	0.57	+0.1
1,628,720	+		Sama_1336	0.57	+0.0
1,628,721	-		Sama_1336	0.57	-0.1
1,628,721	-		Sama_1336	0.57	+0.4
1,628,721	-		Sama_1336	0.57	-0.1
1,628,737	+		Sama_1336	0.58	+1.1
1,628,737	+		Sama_1336	0.58	+0.7
1,628,738	-		Sama_1336	0.58	+0.3
1,628,752	+		Sama_1336	0.59	-1.6
1,628,753	-		Sama_1336	0.59	+0.4
1,628,810	-		Sama_1336	0.61	+0.7
1,628,837	+		Sama_1336	0.62	-0.1
1,628,837	+		Sama_1336	0.62	+1.0
1,628,837	+		Sama_1336	0.62	-0.1
1,628,838	-		Sama_1336	0.63	-0.7
1,628,838	-		Sama_1336	0.63	-0.0
1,628,838	-		Sama_1336	0.63	-0.1
1,628,838	-		Sama_1336	0.63	-0.6
1,628,857	+		Sama_1336	0.63	-0.9
1,628,876	-		Sama_1336	0.64	-0.3
1,628,876	-		Sama_1336	0.64	-0.3
1,628,876	-		Sama_1336	0.64	+0.4
1,628,926	+		Sama_1336	0.66	+0.7
1,628,926	+		Sama_1336	0.66	-2.1
1,628,926	+		Sama_1336	0.66	-2.2
1,628,926	+		Sama_1336	0.66	+0.1
1,628,926	+		Sama_1336	0.66	-1.3
1,628,926	+		Sama_1336	0.66	-0.4
1,628,927	-		Sama_1336	0.66	-0.7
1,628,927	-		Sama_1336	0.66	-1.3
1,628,976	+		Sama_1336	0.69	-0.7
1,628,976	+		Sama_1336	0.69	-0.3
1,628,977	-		Sama_1336	0.69	-0.4
1,629,056	+		Sama_1336	0.72	-0.6
1,629,056	+		Sama_1336	0.72	-1.1
1,629,056	+		Sama_1336	0.72	+1.3
1,629,056	+		Sama_1336	0.72	+0.8
1,629,056	+		Sama_1336	0.72	-0.6
1,629,056	+		Sama_1336	0.72	+0.6
1,629,056	+		Sama_1336	0.72	-1.1
1,629,057	-		Sama_1336	0.72	+0.4
1,629,092	+		Sama_1336	0.74	+1.1
1,629,092	+		Sama_1336	0.74	-0.6
1,629,145	+		Sama_1336	0.76	+1.5
1,629,145	+		Sama_1336	0.76	-1.2
1,629,145	+		Sama_1336	0.76	-0.4
1,629,145	+		Sama_1336	0.76	-0.1
1,629,145	+		Sama_1336	0.76	+0.3
1,629,145	+		Sama_1336	0.76	-0.5
1,629,146	-		Sama_1336	0.76	-0.3
1,629,146	-		Sama_1336	0.76	-0.1
1,629,146	-		Sama_1336	0.76	-0.1
1,629,146	-		Sama_1336	0.76	+0.5
1,629,238	+		Sama_1336	0.80	+0.1
1,629,277	+		Sama_1336	0.82	+1.3
1,629,278	-		Sama_1336	0.82	+0.3
1,629,284	+		Sama_1336	0.82	-1.1
1,629,285	-		Sama_1336	0.82	-0.3
1,629,285	-		Sama_1336	0.82	-0.8
1,629,285	-		Sama_1336	0.82	+2.5
1,629,285	-		Sama_1336	0.82	+0.6
1,629,285	-		Sama_1336	0.82	+0.1
1,629,285	-		Sama_1336	0.82	-0.0
1,629,285	-		Sama_1336	0.82	-0.0
1,629,406	+		Sama_1336	0.87	-0.1
1,629,406	+		Sama_1336	0.87	-0.0
1,629,406	+		Sama_1336	0.87	+1.1
1,629,407	-		Sama_1336	0.87	+0.5
1,629,407	-		Sama_1336	0.87	-1.3
1,629,518	+				+1.0
1,629,590	-				-1.1
1,629,590	-				+0.4
1,629,590	-				-0.1
1,629,597	+				-0.9
1,629,597	+				+0.1
1,629,598	-				-0.4
1,629,654	+				+0.1
1,629,654	+				+0.7
1,629,655	-				+1.1
1,629,655	-				-0.8
1,629,696	+				-0.6
1,629,715	+				+0.4