Strain Fitness in Shewanella amazonensis SB2B around Sama_1246

Experiment: A22 0.0109375 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.0109375 mg/ml
1,528,377	+				-1.3
1,528,378	-				+0.5
1,528,378	-				+1.2
1,528,378	-				+0.8
1,528,380	+				-0.4
1,528,380	+				-0.7
1,528,380	+				-0.4
1,528,381	-				+1.4
1,528,402	+				-0.3
1,528,402	+				+0.6
1,528,402	+				+0.2
1,528,402	+				-0.5
1,528,402	+				+0.1
1,528,402	+				+1.5
1,528,403	-				-0.4
1,528,403	-				-0.5
1,528,403	-				-0.5
1,528,403	-				+1.0
1,528,403	-				-1.8
1,528,403	-				-0.4
1,528,403	-				-0.0
1,528,417	+				-2.5
1,528,437	+				-0.2
1,528,438	-				-0.0
1,528,438	-				-1.2
1,528,458	+				-0.8
1,528,458	+				-0.8
1,528,486	-				-0.1
1,528,501	+				+1.6
1,528,589	+		Sama_1245	0.19	+1.0
1,528,595	+		Sama_1245	0.19	-1.0
1,528,595	+		Sama_1245	0.19	-0.9
1,528,595	+		Sama_1245	0.19	+0.8
1,528,596	-		Sama_1245	0.20	-0.2
1,528,598	+		Sama_1245	0.20	-1.5
1,528,599	-		Sama_1245	0.20	+0.8
1,528,645	+		Sama_1245	0.25	-0.1
1,528,645	+		Sama_1245	0.25	+1.2
1,528,645	+		Sama_1245	0.25	-0.7
1,528,646	-		Sama_1245	0.25	-1.4
1,528,646	-		Sama_1245	0.25	-1.0
1,528,681	+		Sama_1245	0.29	-0.2
1,528,681	+		Sama_1245	0.29	-0.5
1,528,681	+		Sama_1245	0.29	+0.5
1,528,682	-		Sama_1245	0.29	-0.0
1,528,689	+		Sama_1245	0.30	-0.9
1,528,712	-		Sama_1245	0.32	-0.2
1,528,800	+		Sama_1245	0.42	-1.1
1,528,800	+		Sama_1245	0.42	-0.8
1,528,800	+		Sama_1245	0.42	+0.4
1,528,800	+		Sama_1245	0.42	-0.1
1,528,800	+		Sama_1245	0.42	+1.2
1,528,800	+		Sama_1245	0.42	-0.3
1,528,800	+		Sama_1245	0.42	+0.2
1,528,801	-		Sama_1245	0.42	-1.0
1,528,801	-		Sama_1245	0.42	+0.7
1,528,801	-		Sama_1245	0.42	+0.2
1,528,811	+		Sama_1245	0.43	+0.5
1,528,857	+		Sama_1245	0.48	+1.8
1,528,857	+		Sama_1245	0.48	-1.2
1,528,858	-		Sama_1245	0.48	-1.4
1,528,858	-		Sama_1245	0.48	+0.4
1,528,858	-		Sama_1245	0.48	+0.0
1,528,923	+		Sama_1245	0.55	+0.3
1,528,924	-		Sama_1245	0.55	-0.1
1,528,924	-		Sama_1245	0.55	+2.2
1,528,978	+		Sama_1245	0.61	+1.2
1,528,978	+		Sama_1245	0.61	-1.0
1,528,979	-		Sama_1245	0.61	-2.4
1,529,142	+		Sama_1245	0.79	-0.2
1,529,142	+		Sama_1245	0.79	+0.1
1,529,142	+		Sama_1245	0.79	+0.4
1,529,142	+		Sama_1245	0.79	-1.5
1,529,143	-		Sama_1245	0.79	-1.4
1,529,143	-		Sama_1245	0.79	-0.6
1,529,143	-		Sama_1245	0.79	-1.3
1,529,143	-		Sama_1245	0.79	-1.5
1,529,143	-		Sama_1245	0.79	+0.2
1,529,143	-		Sama_1245	0.79	+0.6
1,529,143	-		Sama_1245	0.79	-0.2
1,529,143	-		Sama_1245	0.79	+1.2
1,529,146	+		Sama_1245	0.80	-0.1
1,529,147	-		Sama_1245	0.80	-0.2
1,529,147	-		Sama_1245	0.80	-0.1
1,529,168	+		Sama_1245	0.82	-0.3
1,529,169	-		Sama_1245	0.82	+0.5
1,529,169	-		Sama_1245	0.82	+0.1
1,529,169	-		Sama_1245	0.82	+0.6
1,529,171	+		Sama_1245	0.82	-0.4
1,529,171	+		Sama_1245	0.82	-1.0
1,529,171	+		Sama_1245	0.82	+0.5
1,529,172	-		Sama_1245	0.82	+0.8
1,529,227	+		Sama_1245	0.88	-0.7
1,529,227	+		Sama_1245	0.88	-0.8
1,529,228	-		Sama_1245	0.88	+0.1
1,529,228	-		Sama_1245	0.88	+0.9
1,529,228	-		Sama_1245	0.88	-0.2
1,529,257	+				+0.1
1,529,257	+				-0.3
1,529,257	+				-0.0
1,529,257	+				-0.7
1,529,258	-				-0.2
1,529,305	+				+0.2
1,529,305	+				-0.8
1,529,306	-				+1.4
1,529,317	+				-0.8
1,529,318	-				-0.9
1,529,318	-				-1.5
1,529,361	+				+1.0
1,529,402	+				-0.4
1,529,402	+				-0.8
1,529,403	-				+0.2
1,529,475	+		Sama_1246	0.20	-1.7
1,529,476	-		Sama_1246	0.20	+0.4
1,529,476	-		Sama_1246	0.20	-1.0
1,529,485	+		Sama_1246	0.21	-0.8
1,529,533	+		Sama_1246	0.28	-0.8
1,529,630	+		Sama_1246	0.42	+0.8
1,529,631	-		Sama_1246	0.42	+0.5
1,529,644	+		Sama_1246	0.44	-1.2
1,529,644	+		Sama_1246	0.44	-0.5
1,529,644	+		Sama_1246	0.44	-0.8
1,529,644	+		Sama_1246	0.44	+0.2
1,529,645	-		Sama_1246	0.44	-2.1
1,529,652	-		Sama_1246	0.45	+0.8
1,529,701	-		Sama_1246	0.52	-1.4
1,529,754	-		Sama_1246	0.59	-0.5
1,529,754	-		Sama_1246	0.59	-1.8
1,529,754	-		Sama_1246	0.59	+0.6
1,529,759	+		Sama_1246	0.60	-0.8
1,529,759	+		Sama_1246	0.60	-2.0
1,529,760	-		Sama_1246	0.60	-1.0
1,529,760	-		Sama_1246	0.60	-2.0
1,529,760	-		Sama_1246	0.60	-1.0
1,529,917	-		Sama_1246	0.83	-0.1
1,529,946	-		Sama_1246	0.87	-2.1
1,529,946	-		Sama_1246	0.87	-1.5
1,529,958	+		Sama_1246	0.88	-0.7
1,529,958	+		Sama_1246	0.88	+1.0
1,529,959	-		Sama_1246	0.89	-1.0
1,529,959	-		Sama_1246	0.89	+0.4
1,530,104	+				-0.2
1,530,105	-				-0.2
1,530,199	+		Sama_1247	0.23	+0.6
1,530,255	+		Sama_1247	0.31	-0.1
1,530,256	-		Sama_1247	0.31	+1.4
1,530,256	-		Sama_1247	0.31	-0.5
1,530,259	+		Sama_1247	0.32	-1.0
1,530,269	+		Sama_1247	0.33	-0.2
1,530,270	-		Sama_1247	0.33	-0.1
1,530,352	+		Sama_1247	0.46	-1.2
1,530,353	-		Sama_1247	0.46	-0.5
1,530,353	-		Sama_1247	0.46	-1.0
1,530,353	-		Sama_1247	0.46	+1.0
1,530,354	+		Sama_1247	0.46	-0.3
1,530,354	+		Sama_1247	0.46	+0.2
1,530,354	+		Sama_1247	0.46	-0.7
1,530,355	-		Sama_1247	0.46	+1.0
1,530,400	+		Sama_1247	0.53	+1.1
1,530,427	-		Sama_1247	0.57	+1.4
1,530,538	+		Sama_1247	0.74	-0.4
1,530,538	+		Sama_1247	0.74	-1.2
1,530,539	-		Sama_1247	0.74	-0.6
1,530,539	-		Sama_1247	0.74	+1.2
1,530,585	+		Sama_1247	0.81	-0.1
1,530,649	+				+0.2
1,530,650	-				-1.3
1,530,694	+				+0.2
1,530,695	-				-0.0
1,530,695	-				+0.5
1,530,704	+				+0.3
1,530,705	-				-0.9
1,530,705	-				+0.9
1,530,761	+				+0.4
1,530,762	-				-0.9
1,530,884	+		Sama_1248	0.23	+1.8
1,530,885	-		Sama_1248	0.23	-0.2
1,530,894	+		Sama_1248	0.24	-0.4
1,530,895	-		Sama_1248	0.24	-1.2
1,530,912	-		Sama_1248	0.26	-0.2
1,531,025	-		Sama_1248	0.41	+0.2