Strain Fitness in Shewanella oneidensis MR-1 around SO3211

Experiment: Vancomycin 0.03 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.03 mg/ml
3,349,899	+	cheY-3	SO3209	0.46	-0.1
3,350,007	+	cheY-3	SO3209	0.74	+0.4
3,350,116	-				+1.2
3,350,191	-				-0.0
3,350,534	-	fliA	SO3210	0.53	-1.0
3,350,671	-	fliA	SO3210	0.72	-0.2
3,350,686	-	fliA	SO3210	0.74	+0.2
3,350,731	-	fliA	SO3210	0.81	-2.0
3,350,732	+	fliA	SO3210	0.81	-0.9
3,350,845	+				-0.5
3,350,853	-				+0.3
3,350,853	-				+0.5
3,350,853	-				+0.3
3,351,311	-	flhG	SO3211	0.53	-1.1
3,351,457	-	flhG	SO3211	0.70	-1.1
3,351,511	-	flhG	SO3211	0.76	-1.2
3,351,571	-	flhG	SO3211	0.83	-1.9
3,351,591	+	flhG	SO3211	0.86	-0.5
3,351,638	+				+1.1
3,351,646	-				-1.2
3,351,770	-				+0.2
3,351,770	-				+0.4
3,351,982	-	flhF	SO3212	0.17	-0.1
3,352,025	-	flhF	SO3212	0.20	+0.4
3,352,032	+	flhF	SO3212	0.21	-1.2
3,352,045	-	flhF	SO3212	0.22	+1.5
3,352,109	+	flhF	SO3212	0.26	-0.5
3,352,260	+	flhF	SO3212	0.37	+0.3
3,352,310	-	flhF	SO3212	0.41	+0.0
3,352,383	+	flhF	SO3212	0.46	-0.6
3,352,621	-	flhF	SO3212	0.63	-1.0
3,352,690	+	flhF	SO3212	0.68	+0.4