Strain Fitness in Shewanella oneidensis MR-1 around SO2204

Experiment: Vancomycin 0.03 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.03 mg/ml
2,317,107	+		SO2202	0.66	-1.8
2,317,107	+		SO2202	0.66	+0.2
2,317,115	+		SO2202	0.67	+1.9
2,317,130	+		SO2202	0.69	-0.5
2,317,130	+		SO2202	0.69	+0.1
2,317,138	-		SO2202	0.70	-0.5
2,317,138	-		SO2202	0.70	-0.1
2,317,258	-		SO2202	0.84	-0.4
2,317,263	-		SO2202	0.84	+0.1
2,317,300	+		SO2202	0.89	+0.1
2,317,308	-		SO2202	0.90	+0.2
2,317,308	-		SO2202	0.90	+0.8
2,317,308	-		SO2202	0.90	+0.5
2,317,308	-		SO2202	0.90	-1.4
2,317,308	-		SO2202	0.90	-0.0
2,317,515	-				-0.6
2,317,522	+				-0.7
2,317,541	+	dgkA	SO2203	0.12	+0.7
2,317,549	-	dgkA	SO2203	0.14	+1.4
2,317,609	-	dgkA	SO2203	0.28	+0.1
2,317,652	-	dgkA	SO2203	0.39	+0.3
2,317,713	-	dgkA	SO2203	0.54	+0.4
2,318,023	+				+0.2
2,318,023	+				+0.3
2,318,023	+				-1.1
2,318,036	-				+0.5
2,318,036	-				-0.3
2,318,095	-				+1.0
2,318,342	-		SO2204	0.27	+0.8
2,318,365	-		SO2204	0.29	-0.6
2,318,434	+		SO2204	0.37	-0.4
2,318,538	+		SO2204	0.48	+0.6
2,318,540	+		SO2204	0.48	+0.9
2,318,623	+		SO2204	0.57	+0.4
2,318,670	+		SO2204	0.62	+1.2
2,318,678	-		SO2204	0.63	+0.0
2,318,731	+		SO2204	0.68	+0.4
2,318,745	-		SO2204	0.70	+0.8
2,318,802	-		SO2204	0.76	+0.0
2,318,864	-		SO2204	0.83	+0.1
2,318,879	+		SO2204	0.84	-0.0
2,318,879	+		SO2204	0.84	+0.5
2,318,887	-		SO2204	0.85	+0.1
2,318,931	+		SO2204	0.90	+1.2
2,318,989	+				+0.0
2,319,153	+				-1.2
2,319,155	-				+0.1
2,319,221	+				-0.4
2,319,371	+		SO2205	0.82	+0.2
2,319,437	+				+0.2
2,319,437	+				+0.6
2,319,610	-				-0.5
2,319,750	+		SO2207	0.17	-0.0
2,319,761	+		SO2207	0.20	+0.7
2,319,761	+		SO2207	0.20	+0.8
2,319,836	+		SO2207	0.38	+0.3
2,319,836	+		SO2207	0.38	-0.3
2,319,946	+		SO2207	0.65	-0.1