Strain Fitness in Shewanella oneidensis MR-1 around SO0010

Experiment: Vancomycin 0.03 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.03 mg/ml
9,363	-				+0.3
9,368	+				-0.5
9,418	+				-0.4
9,418	+				-0.0
9,426	-				-1.2
9,426	-				+0.3
9,427	+				+0.0
9,507	-				+0.1
9,507	-				-0.6
9,507	-				+0.5
9,507	-				-0.6
9,543	+				-0.6
9,543	+				-0.4
9,551	-				-0.6
9,551	-				+0.2
9,617	-				+0.5
9,617	-				-0.2
9,746	-	recF	SO0010	0.19	-0.5
9,756	+	recF	SO0010	0.20	-0.5
9,764	-	recF	SO0010	0.21	-1.0
9,842	+	recF	SO0010	0.28	-1.5
9,863	+	recF	SO0010	0.30	-0.3
9,966	-	recF	SO0010	0.39	-0.8
10,144	+	recF	SO0010	0.56	-0.6
10,144	+	recF	SO0010	0.56	-0.3
10,144	+	recF	SO0010	0.56	-0.6
10,177	+	recF	SO0010	0.59	-0.6
10,259	+	recF	SO0010	0.66	-0.7
10,291	+	recF	SO0010	0.69	-2.5