Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0093

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
92,620	-		Psest_0091	0.76	+1.2
92,838	+				+1.2
92,839	-				+0.2
92,839	-				+1.2
92,840	+				+1.2
93,386	+		Psest_0092	0.72	+0.6
93,715	+		Psest_0093	0.12	-0.8
93,715	+		Psest_0093	0.12	-1.4
93,715	+		Psest_0093	0.12	-0.4
93,809	-		Psest_0093	0.23	-1.1
93,809	-		Psest_0093	0.23	+2.2
93,923	-		Psest_0093	0.36	+0.2
93,952	+		Psest_0093	0.39	-0.8
93,953	-		Psest_0093	0.39	+1.2
94,096	+		Psest_0093	0.56	+1.2
94,096	+		Psest_0093	0.56	+2.2
94,096	+		Psest_0093	0.56	-1.4
94,444	+				-0.3
94,444	+				+1.2
94,584	+				-0.4
94,584	+				+1.2
94,584	+				+1.5
94,584	+				-1.1
94,585	-				+0.2
94,585	-				+0.2
94,585	-				-0.4
94,585	-				-1.1
95,217	+		Psest_0094	0.67	+0.6
95,217	+		Psest_0094	0.67	+0.2
95,218	-		Psest_0094	0.67	+0.6
95,218	-		Psest_0094	0.67	-0.4
95,218	-		Psest_0094	0.67	-0.6