Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0947

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
1,024,659	+				-0.6
1,024,659	+				-0.7
1,024,660	-				-0.2
1,024,660	-				+2.0
1,024,672	+				-0.2
1,024,672	+				-0.3
1,024,672	+				+0.0
1,024,672	+				-0.5
1,024,672	+				-0.2
1,024,672	+				-0.4
1,024,672	+				+0.2
1,024,672	+				-0.5
1,024,672	+				+0.4
1,024,672	+				-0.5
1,024,672	+				-0.2
1,024,672	+				-1.0
1,024,672	+				+0.6
1,024,672	+				+0.2
1,024,673	-				+1.6
1,024,673	-				+0.5
1,024,673	-				+0.4
1,024,673	-				+0.4
1,024,673	-				+0.1
1,024,673	-				+0.4
1,024,724	+				-0.7
1,024,725	-				+0.2
1,024,725	-				+0.4
1,024,798	+				+0.3
1,024,799	-				-0.1
1,024,799	-				+0.4
1,024,799	-				-0.0
1,024,825	-				+0.2
1,024,825	-				+0.2
1,024,905	-				-0.5
1,024,971	+				-1.0
1,025,005	+				-2.0
1,025,005	+				+0.2
1,025,006	-				-0.2
1,025,006	-				-0.2
1,025,006	-				-0.0
1,025,006	-				-0.3
1,025,006	-				-1.1
1,025,034	+				+0.0
1,025,034	+				+1.1
1,025,035	-				+0.7
1,025,152	+				+0.3
1,025,153	-				+0.1
1,025,153	-				-1.6
1,025,153	-				+0.2
1,025,181	+				+0.2
1,025,181	+				+0.2
1,025,182	-				+0.5
1,025,249	+				+0.1
1,025,249	+				-0.4
1,025,250	-				+2.0
1,025,302	+				-0.3
1,025,540	+				+0.2
1,025,541	-				+1.0
1,025,541	-				-0.6
1,025,541	-				-0.4
1,025,541	-				+0.3
1,025,588	+				-0.6
1,025,588	+				-0.5
1,025,588	+				+0.1
1,025,589	-				+0.2
1,025,589	-				+0.7
1,025,589	-				-0.4
1,025,589	-				-0.9
1,025,661	+				+0.2
1,025,699	+				+0.5
1,025,699	+				+0.2
1,025,699	+				+1.5
1,025,699	+				+1.6
1,025,699	+				+0.3
1,025,699	+				+1.6
1,025,756	+		Psest_0947	0.13	-0.6
1,025,757	-		Psest_0947	0.13	-0.2
1,025,757	-		Psest_0947	0.13	+0.9
1,025,804	+		Psest_0947	0.17	-0.2
1,025,805	-		Psest_0947	0.17	+0.2
1,025,824	+		Psest_0947	0.19	+0.4
1,025,824	+		Psest_0947	0.19	-0.5
1,025,824	+		Psest_0947	0.19	-0.3
1,025,825	-		Psest_0947	0.19	+0.5
1,025,825	-		Psest_0947	0.19	+0.6
1,025,825	-		Psest_0947	0.19	-0.8
1,025,825	-		Psest_0947	0.19	+0.4
1,025,825	-		Psest_0947	0.19	+0.8
1,025,918	+		Psest_0947	0.26	+0.1
1,025,918	+		Psest_0947	0.26	-0.1
1,025,918	+		Psest_0947	0.26	+0.9
1,025,969	+		Psest_0947	0.30	+0.4
1,025,969	+		Psest_0947	0.30	+0.6
1,025,969	+		Psest_0947	0.30	+0.6
1,025,969	+		Psest_0947	0.30	-0.1
1,025,970	-		Psest_0947	0.30	+0.2
1,025,971	+		Psest_0947	0.30	-0.3
1,025,971	+		Psest_0947	0.30	-0.2
1,025,971	+		Psest_0947	0.30	+0.3
1,025,971	+		Psest_0947	0.30	+0.1
1,025,971	+		Psest_0947	0.30	+0.5
1,025,971	+		Psest_0947	0.30	+0.7
1,025,971	+		Psest_0947	0.30	-0.7
1,025,971	+		Psest_0947	0.30	+0.8
1,025,971	+		Psest_0947	0.30	+0.2
1,025,972	-		Psest_0947	0.30	-0.0
1,025,972	-		Psest_0947	0.30	+0.4
1,025,972	-		Psest_0947	0.30	-0.2
1,025,972	-		Psest_0947	0.30	-0.7
1,025,972	-		Psest_0947	0.30	+0.4
1,025,972	-		Psest_0947	0.30	-0.9
1,025,972	-		Psest_0947	0.30	-0.4
1,025,972	-		Psest_0947	0.30	+0.2
1,025,972	-		Psest_0947	0.30	-0.1
1,025,972	-		Psest_0947	0.30	+0.2
1,026,053	-		Psest_0947	0.37	+1.1
1,026,157	+		Psest_0947	0.45	+0.1
1,026,157	+		Psest_0947	0.45	-0.4
1,026,227	+		Psest_0947	0.51	+0.2
1,026,227	+		Psest_0947	0.51	+0.3
1,026,228	-		Psest_0947	0.51	-1.6
1,026,228	-		Psest_0947	0.51	-0.4
1,026,276	-		Psest_0947	0.54	-0.0
1,026,346	-		Psest_0947	0.60	+2.7
1,026,349	+		Psest_0947	0.60	+0.5
1,026,350	-		Psest_0947	0.60	+0.7
1,026,382	-		Psest_0947	0.63	+0.1
1,026,382	-		Psest_0947	0.63	-0.1
1,026,390	+		Psest_0947	0.63	+0.2
1,026,390	+		Psest_0947	0.63	+0.6
1,026,391	-		Psest_0947	0.64	-0.2
1,026,391	-		Psest_0947	0.64	+0.9
1,026,411	+		Psest_0947	0.65	+1.3
1,026,412	-		Psest_0947	0.65	-0.4
1,026,439	+		Psest_0947	0.67	+0.3
1,026,439	+		Psest_0947	0.67	+0.4
1,026,439	+		Psest_0947	0.67	+0.8
1,026,439	+		Psest_0947	0.67	+0.7
1,026,440	-		Psest_0947	0.67	-0.1
1,026,440	-		Psest_0947	0.67	-0.1
1,026,461	+		Psest_0947	0.69	+1.0
1,026,462	-		Psest_0947	0.69	-0.2
1,026,464	+		Psest_0947	0.69	+0.6
1,026,464	+		Psest_0947	0.69	-0.2
1,026,464	+		Psest_0947	0.69	+0.4
1,026,464	+		Psest_0947	0.69	+0.4
1,026,464	+		Psest_0947	0.69	+0.1
1,026,465	-		Psest_0947	0.69	-0.3
1,026,465	-		Psest_0947	0.69	+0.8
1,026,465	-		Psest_0947	0.69	-0.5
1,026,465	-		Psest_0947	0.69	+0.1
1,026,465	-		Psest_0947	0.69	+0.4
1,026,465	-		Psest_0947	0.69	-0.1
1,026,465	-		Psest_0947	0.69	+0.5
1,026,486	+		Psest_0947	0.71	+0.6
1,026,486	+		Psest_0947	0.71	+1.3
1,026,487	-		Psest_0947	0.71	-0.3
1,026,579	+		Psest_0947	0.78	-0.1
1,026,585	+		Psest_0947	0.79	+0.3
1,026,633	+		Psest_0947	0.83	+0.4
1,026,633	+		Psest_0947	0.83	+0.1
1,026,634	-		Psest_0947	0.83	-1.2
1,026,634	-		Psest_0947	0.83	+0.4
1,026,634	-		Psest_0947	0.83	+0.5
1,026,634	-		Psest_0947	0.83	+1.0
1,026,634	-		Psest_0947	0.83	+0.3
1,026,634	-		Psest_0947	0.83	+1.3
1,026,653	+		Psest_0947	0.84	+0.2
1,026,653	+		Psest_0947	0.84	+0.1
1,026,653	+		Psest_0947	0.84	+0.9
1,026,684	+		Psest_0947	0.87	-1.8
1,026,684	+		Psest_0947	0.87	-0.8
1,026,685	-		Psest_0947	0.87	+0.4
1,026,685	-		Psest_0947	0.87	+1.0
1,026,685	-		Psest_0947	0.87	+0.7
1,026,685	-		Psest_0947	0.87	+1.1
1,026,685	-		Psest_0947	0.87	-0.9
1,026,685	-		Psest_0947	0.87	+0.3
1,026,706	+		Psest_0947	0.88	-0.2
1,026,797	-				+1.9
1,026,817	-				+0.0
1,026,818	+				+0.9
1,026,819	-				-1.4
1,026,819	-				-0.6
1,026,819	-				+0.1
1,026,844	+				-0.1
1,026,844	+				+0.6
1,026,845	-				+0.5
1,026,845	-				+0.4
1,026,845	-				-0.2
1,026,845	-				+0.6
1,026,852	+				-0.5
1,026,852	+				+0.3
1,026,852	+				+0.4
1,026,852	+				+0.0
1,026,853	-				+0.2
1,026,853	-				+0.5
1,026,853	-				-0.5
1,026,853	-				-0.1
1,026,853	-				-0.8
1,026,853	-				+0.1
1,026,853	-				+0.3
1,026,853	-				-0.5
1,026,853	-				-0.3
1,026,853	-				+0.5
1,026,853	-				-0.2
1,026,853	-				+0.0
1,026,853	-				-0.3
1,026,853	-				-0.1
1,026,853	-				-0.6
1,026,853	-				+0.5
1,026,853	-				+0.4
1,026,853	-				+3.4
1,026,853	-				-0.2
1,026,853	-				+0.7
1,026,853	-				+0.6
1,026,853	-				-0.4
1,026,853	-				-2.4
1,026,853	-				+0.3
1,026,854	+				-0.4
1,026,854	+				+0.8
1,026,854	+				+0.3
1,026,854	+				-0.4
1,026,854	+				+0.4
1,026,855	-				-0.8
1,026,855	-				+0.2
1,026,855	-				-0.5
1,026,855	-				+1.5
1,026,855	-				+1.8
1,026,855	-				+0.8
1,026,855	-				+1.9
1,026,855	-				+0.8
1,026,855	-				-0.4
1,026,855	-				-0.4
1,026,855	-				+0.1
1,026,855	-				+0.3
1,026,855	-				-0.3
1,026,855	-				-0.2
1,026,856	+				+0.0
1,026,856	+				+1.7
1,026,856	+				+0.2
1,026,856	+				-0.5
1,026,856	+				+1.0
1,026,883	+				+0.3
1,026,884	-				+1.0
1,026,886	+				+0.7
1,026,887	-				+0.4
1,026,960	-				-0.2
1,026,974	+				+0.3
1,026,974	+				+0.1
1,027,019	+				-1.4
1,027,019	+				+0.8
1,027,025	+				+0.3
1,027,026	-				-0.4
1,027,114	+				+0.1
1,027,203	-				+0.3
1,027,227	+				+1.2
1,027,227	+				+0.5
1,027,227	+				+0.3
1,027,228	-				+0.3
1,027,234	-				-0.4
1,027,234	-				+0.3
1,027,299	+		Psest_0949	0.11	+0.3
1,027,299	+		Psest_0949	0.11	-0.3
1,027,299	+		Psest_0949	0.11	+0.3
1,027,300	-		Psest_0949	0.11	-0.1
1,027,305	+		Psest_0949	0.12	-1.5
1,027,305	+		Psest_0949	0.12	+0.5
1,027,305	+		Psest_0949	0.12	-0.2
1,027,305	+		Psest_0949	0.12	+0.4
1,027,306	-		Psest_0949	0.12	-0.0
1,027,306	-		Psest_0949	0.12	+0.6
1,027,306	-		Psest_0949	0.12	+0.2
1,027,306	-		Psest_0949	0.12	-0.5
1,027,322	+		Psest_0949	0.12	-0.4
1,027,322	+		Psest_0949	0.12	+0.3
1,027,322	+		Psest_0949	0.12	-1.5
1,027,323	-		Psest_0949	0.12	+0.1
1,027,323	-		Psest_0949	0.12	+0.5
1,027,323	-		Psest_0949	0.12	+0.2
1,027,323	-		Psest_0949	0.12	+0.1
1,027,323	-		Psest_0949	0.12	+0.5
1,027,323	-		Psest_0949	0.12	+1.3
1,027,361	+		Psest_0949	0.14	+0.4
1,027,362	-		Psest_0949	0.14	-1.3
1,027,362	-		Psest_0949	0.14	+0.2
1,027,362	-		Psest_0949	0.14	+0.0
1,027,362	-		Psest_0949	0.14	+0.1
1,027,392	-		Psest_0949	0.15	+0.6
1,027,431	-		Psest_0949	0.17	+0.3
1,027,441	-		Psest_0949	0.17	+0.1
1,027,465	-		Psest_0949	0.18	+0.2
1,027,473	+		Psest_0949	0.18	+0.3
1,027,473	+		Psest_0949	0.18	+0.9
1,027,473	+		Psest_0949	0.18	-0.0
1,027,473	+		Psest_0949	0.18	+0.4
1,027,474	-		Psest_0949	0.18	+0.3
1,027,474	-		Psest_0949	0.18	+1.8
1,027,474	-		Psest_0949	0.18	+0.2
1,027,477	+		Psest_0949	0.18	-0.8
1,027,477	+		Psest_0949	0.18	+0.3
1,027,477	+		Psest_0949	0.18	-0.4
1,027,477	+		Psest_0949	0.18	+0.4
1,027,477	+		Psest_0949	0.18	+0.3
1,027,477	+		Psest_0949	0.18	+0.4
1,027,477	+		Psest_0949	0.18	-0.4
1,027,477	+		Psest_0949	0.18	+0.6
1,027,477	+		Psest_0949	0.18	+0.1
1,027,477	+		Psest_0949	0.18	-0.4
1,027,477	+		Psest_0949	0.18	-0.7
1,027,478	-		Psest_0949	0.18	+0.6
1,027,478	-		Psest_0949	0.18	-0.2
1,027,478	-		Psest_0949	0.18	-0.2
1,027,478	-		Psest_0949	0.18	+0.8
1,027,478	-		Psest_0949	0.18	-0.1
1,027,478	-		Psest_0949	0.18	+0.8
1,027,478	-		Psest_0949	0.18	+0.3
1,027,478	-		Psest_0949	0.18	+0.7
1,027,478	-		Psest_0949	0.18	-0.2
1,027,478	-		Psest_0949	0.18	+0.0
1,027,478	-		Psest_0949	0.18	+0.4
1,027,478	-		Psest_0949	0.18	-0.6
1,027,478	-		Psest_0949	0.18	+0.6
1,027,478	-		Psest_0949	0.18	-0.3
1,027,478	-		Psest_0949	0.18	+0.3
1,027,478	-		Psest_0949	0.18	-0.3
1,027,478	-		Psest_0949	0.18	+0.4
1,027,478	-		Psest_0949	0.18	+0.1
1,027,478	-		Psest_0949	0.18	+0.1
1,027,478	-		Psest_0949	0.18	+0.1
1,027,478	-		Psest_0949	0.18	+0.5
1,027,672	-		Psest_0949	0.26	+0.8
1,027,673	+		Psest_0949	0.26	-0.1
1,027,673	+		Psest_0949	0.26	+0.9
1,027,673	+		Psest_0949	0.26	+0.5
1,027,674	-		Psest_0949	0.26	+0.4
1,027,704	-		Psest_0949	0.28	+0.3
1,027,704	-		Psest_0949	0.28	-0.2
1,027,742	+		Psest_0949	0.29	+1.3
1,027,783	-		Psest_0949	0.31	+0.4
1,027,784	+		Psest_0949	0.31	-0.1
1,027,784	+		Psest_0949	0.31	+0.5
1,027,784	+		Psest_0949	0.31	+1.5
1,027,784	+		Psest_0949	0.31	+0.7
1,027,784	+		Psest_0949	0.31	+0.3
1,027,784	+		Psest_0949	0.31	+1.5
1,027,784	+		Psest_0949	0.31	-0.1
1,027,784	+		Psest_0949	0.31	+0.4
1,027,784	+		Psest_0949	0.31	-0.4
1,027,784	+		Psest_0949	0.31	+1.0
1,027,784	+		Psest_0949	0.31	-0.2
1,027,784	+		Psest_0949	0.31	-0.5
1,027,785	-		Psest_0949	0.31	-0.1
1,027,785	-		Psest_0949	0.31	+0.4
1,027,785	-		Psest_0949	0.31	+0.9
1,027,785	-		Psest_0949	0.31	+0.6
1,027,785	-		Psest_0949	0.31	+0.5
1,027,785	-		Psest_0949	0.31	+0.0
1,027,785	-		Psest_0949	0.31	+0.3