Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4302

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
4,498,726	+		Psest_4300	0.83	+0.6
4,498,814	-		Psest_4300	0.86	-0.3
4,498,873	+		Psest_4300	0.88	+0.6
4,498,873	+		Psest_4300	0.88	+0.4
4,498,873	+		Psest_4300	0.88	+1.2
4,498,874	-		Psest_4300	0.88	+0.0
4,499,286	-		Psest_4301	0.18	+0.5
4,499,286	-		Psest_4301	0.18	+0.8
4,499,286	-		Psest_4301	0.18	-0.1
4,499,286	-		Psest_4301	0.18	+0.9
4,499,286	-		Psest_4301	0.18	+1.2
4,499,402	+		Psest_4301	0.48	-0.8
4,499,534	+		Psest_4301	0.82	+1.2
4,499,534	+		Psest_4301	0.82	-1.4
4,499,535	-		Psest_4301	0.82	-0.2
4,499,535	-		Psest_4301	0.82	-1.3
4,499,535	-		Psest_4301	0.82	+0.1
4,499,821	+		Psest_4302	0.19	-0.0
4,499,822	-		Psest_4302	0.19	-0.9
4,500,133	+		Psest_4302	0.47	+0.2
4,500,133	+		Psest_4302	0.47	-0.4
4,500,133	+		Psest_4302	0.47	+1.2
4,500,134	-		Psest_4302	0.47	+1.2
4,500,134	-		Psest_4302	0.47	-0.8
4,500,134	-		Psest_4302	0.47	+2.8
4,500,290	-		Psest_4302	0.61	+1.2
4,500,290	-		Psest_4302	0.61	-0.8
4,500,290	-		Psest_4302	0.61	-0.8
4,500,290	-		Psest_4302	0.61	-0.8
4,500,290	-		Psest_4302	0.61	+0.2
4,500,424	+		Psest_4302	0.72	+0.2
4,500,449	-		Psest_4302	0.74	+0.2
4,500,514	+		Psest_4302	0.80	+1.2
4,500,514	+		Psest_4302	0.80	+0.2
4,500,514	+		Psest_4302	0.80	-1.1
4,500,515	-		Psest_4302	0.80	+1.2
4,500,515	-		Psest_4302	0.80	+1.2
4,500,515	-		Psest_4302	0.80	+1.2
4,500,517	+		Psest_4302	0.80	+0.6
4,500,517	+		Psest_4302	0.80	+0.2
4,500,517	+		Psest_4302	0.80	-0.0
4,500,517	+		Psest_4302	0.80	+0.2
4,500,517	+		Psest_4302	0.80	+0.6
4,500,517	+		Psest_4302	0.80	+1.2
4,500,517	+		Psest_4302	0.80	-0.8
4,500,518	-		Psest_4302	0.81	-0.4
4,500,518	-		Psest_4302	0.81	+0.2
4,500,518	-		Psest_4302	0.81	-1.1
4,500,518	-		Psest_4302	0.81	-0.4
4,500,518	-		Psest_4302	0.81	-0.8
4,500,518	-		Psest_4302	0.81	+0.6
4,500,520	+		Psest_4302	0.81	+2.2
4,500,535	+		Psest_4302	0.82	-0.0
4,500,535	+		Psest_4302	0.82	+1.2
4,500,535	+		Psest_4302	0.82	-2.1
4,500,536	-		Psest_4302	0.82	+0.2
4,500,691	+				+1.2
4,500,691	+				+0.2
4,500,691	+				+0.2
4,500,691	+				+0.2
4,500,692	-				+0.2
4,500,692	-				+1.2
4,500,694	+				-0.1
4,500,694	+				+2.8
4,500,694	+				+0.2
4,500,833	+				+0.2
4,500,833	+				-0.4
4,500,833	+				+1.2
4,500,834	-				+0.6
4,500,834	-				-1.4
4,500,834	-				-0.4
4,500,834	-				+0.2
4,500,834	-				+0.2
4,500,858	+				-0.1
4,500,858	+				+0.2
4,500,871	-				-1.8
4,500,882	+				+1.2
4,500,882	+				+1.2
4,500,882	+				-0.4
4,500,883	-				-0.2
4,500,954	-		Psest_4303	0.13	-1.8
4,501,224	+		Psest_4303	0.39	+2.2