Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4280

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
4,470,513	+		Psest_4279	0.52	-0.6
4,470,702	+		Psest_4279	0.67	-0.4
4,470,703	-		Psest_4279	0.67	-0.0
4,470,703	-		Psest_4279	0.67	+0.5
4,470,712	-		Psest_4279	0.67	-0.6
4,470,865	-		Psest_4279	0.80	-0.2
4,470,913	+		Psest_4279	0.83	-1.7
4,470,913	+		Psest_4279	0.83	-0.8
4,470,913	+		Psest_4279	0.83	-0.1
4,470,913	+		Psest_4279	0.83	-1.7
4,471,145	+				-1.4
4,471,145	+				-0.4
4,471,145	+				-0.1
4,471,145	+				-0.9
4,471,146	-				-0.5
4,471,146	-				+0.0
4,471,146	-				-1.6
4,471,215	+				-0.6
4,471,237	-				+1.5
4,471,237	-				-0.9
4,471,265	+				-1.0
4,471,266	-				-0.3
4,471,266	-				+0.8
4,471,329	+				+0.8
4,471,329	+				-2.0
4,471,329	+				+0.6
4,471,330	-				-1.0
4,471,330	-				-0.6
4,471,330	-				+0.6
4,471,330	-				+0.0
4,471,330	-				+1.2
4,471,781	+		Psest_4280	0.51	+0.4
4,471,909	+		Psest_4280	0.65	+0.2
4,471,910	-		Psest_4280	0.65	-1.1
4,472,021	+		Psest_4280	0.77	+0.7
4,472,022	-		Psest_4280	0.77	-0.7
4,472,022	-		Psest_4280	0.77	+0.3
4,472,087	+		Psest_4280	0.84	+0.6
4,472,144	+				-0.2
4,472,144	+				-0.3
4,472,144	+				-0.4
4,472,144	+				+1.1
4,472,145	-				+0.1
4,472,145	-				+0.2
4,472,145	-				-0.7
4,472,145	-				+0.2
4,472,145	-				-0.8
4,472,171	+				+0.4
4,472,172	-				-1.0
4,472,226	+				+0.2
4,472,226	+				+0.5
4,472,226	+				-0.4
4,472,226	+				-0.5
4,472,226	+				+0.4
4,472,226	+				+0.6
4,472,226	+				-0.3
4,472,227	-				-0.2
4,472,227	-				+0.3
4,472,227	-				-0.5
4,472,227	-				-0.9
4,472,227	-				-0.0
4,472,227	-				-0.1
4,472,227	-				+0.3
4,472,227	-				+0.0
4,472,567	-		Psest_4281	0.38	+0.9
4,472,593	+		Psest_4281	0.41	+2.0
4,472,593	+		Psest_4281	0.41	-0.1
4,472,594	-		Psest_4281	0.41	-1.0
4,472,594	-		Psest_4281	0.41	-0.4
4,472,599	+		Psest_4281	0.42	-0.1
4,472,599	+		Psest_4281	0.42	+0.5
4,472,599	+		Psest_4281	0.42	-0.8
4,472,599	+		Psest_4281	0.42	-0.8
4,472,599	+		Psest_4281	0.42	+0.3
4,472,599	+		Psest_4281	0.42	+0.6
4,472,599	+		Psest_4281	0.42	-0.5
4,472,600	-		Psest_4281	0.42	+1.4
4,472,614	+		Psest_4281	0.44	+0.3
4,472,614	+		Psest_4281	0.44	-1.3
4,472,614	+		Psest_4281	0.44	+0.8
4,472,614	+		Psest_4281	0.44	+0.5
4,472,614	+		Psest_4281	0.44	-0.5
4,472,614	+		Psest_4281	0.44	-0.1
4,472,614	+		Psest_4281	0.44	-1.2
4,472,614	+		Psest_4281	0.44	-1.2
4,472,614	+		Psest_4281	0.44	+0.9
4,472,614	+		Psest_4281	0.44	+0.3
4,472,615	-		Psest_4281	0.44	+0.8
4,472,615	-		Psest_4281	0.44	-0.9
4,472,682	-		Psest_4281	0.51	+0.2
4,472,723	-		Psest_4281	0.56	-0.4
4,472,813	-		Psest_4281	0.66	+0.2
4,472,813	-		Psest_4281	0.66	+0.7
4,472,881	+		Psest_4281	0.73	+1.2
4,472,882	-		Psest_4281	0.73	-0.3
4,472,893	+		Psest_4281	0.75	+0.1
4,472,893	+		Psest_4281	0.75	+1.8
4,472,893	+		Psest_4281	0.75	-0.2
4,472,893	+		Psest_4281	0.75	+1.1
4,472,893	+		Psest_4281	0.75	+0.0
4,472,893	+		Psest_4281	0.75	-1.1
4,472,894	-		Psest_4281	0.75	-0.0
4,472,894	-		Psest_4281	0.75	+0.8
4,472,894	-		Psest_4281	0.75	-0.6
4,472,894	-		Psest_4281	0.75	-0.2
4,472,920	+		Psest_4281	0.78	-0.7
4,472,920	+		Psest_4281	0.78	-0.4
4,472,920	+		Psest_4281	0.78	-0.6
4,472,920	+		Psest_4281	0.78	+0.4
4,472,920	+		Psest_4281	0.78	+0.7
4,472,920	+		Psest_4281	0.78	-0.1
4,472,920	+		Psest_4281	0.78	+0.6
4,472,920	+		Psest_4281	0.78	-0.8
4,472,920	+		Psest_4281	0.78	+1.2
4,472,920	+		Psest_4281	0.78	+0.3
4,472,920	+		Psest_4281	0.78	-0.2
4,472,920	+		Psest_4281	0.78	+0.1
4,472,920	+		Psest_4281	0.78	-0.2
4,472,920	+		Psest_4281	0.78	+0.4
4,472,920	+		Psest_4281	0.78	-0.1
4,472,921	-		Psest_4281	0.78	-0.5
4,472,921	-		Psest_4281	0.78	+0.5
4,472,921	-		Psest_4281	0.78	+0.2
4,472,921	-		Psest_4281	0.78	+0.2
4,472,921	-		Psest_4281	0.78	-0.1
4,472,921	-		Psest_4281	0.78	+0.4
4,472,921	-		Psest_4281	0.78	-0.1
4,472,921	-		Psest_4281	0.78	-0.6
4,472,921	-		Psest_4281	0.78	-0.1
4,472,921	-		Psest_4281	0.78	-0.1
4,472,921	-		Psest_4281	0.78	+0.1
4,472,940	+		Psest_4281	0.80	+0.5
4,472,941	-		Psest_4281	0.80	+0.6
4,472,962	+		Psest_4281	0.82	+0.4
4,472,962	+		Psest_4281	0.82	-1.1
4,472,962	+		Psest_4281	0.82	-0.7
4,472,963	-		Psest_4281	0.82	+0.3
4,472,978	+		Psest_4281	0.84	-0.1
4,472,978	+		Psest_4281	0.84	-1.7
4,472,979	-		Psest_4281	0.84	+0.8
4,472,979	-		Psest_4281	0.84	-1.1
4,472,979	-		Psest_4281	0.84	+0.2
4,472,979	-		Psest_4281	0.84	-0.4
4,472,979	-		Psest_4281	0.84	+1.1
4,472,979	-		Psest_4281	0.84	-0.3
4,472,980	+		Psest_4281	0.84	+0.4
4,472,981	-		Psest_4281	0.85	+0.7
4,472,981	-		Psest_4281	0.85	-0.4
4,472,981	-		Psest_4281	0.85	-0.2
4,473,098	+				+0.2
4,473,159	+				+0.5
4,473,159	+				-0.5
4,473,159	+				+1.0
4,473,159	+				-0.0
4,473,159	+				-0.1
4,473,159	+				+0.2
4,473,159	+				+1.0
4,473,159	+				+0.2
4,473,159	+				-0.0
4,473,159	+				+0.2
4,473,159	+				-1.1
4,473,159	+				-0.4
4,473,159	+				+0.2
4,473,159	+				+1.1
4,473,159	+				-0.2
4,473,159	+				-0.5
4,473,160	-				-1.8
4,473,160	-				+0.5
4,473,160	-				+0.2
4,473,160	-				+0.1
4,473,160	-				-0.3
4,473,160	-				-0.1
4,473,160	-				-0.0
4,473,160	-				-0.1
4,473,160	-				-0.1
4,473,160	-				-0.5
4,473,160	-				+1.2
4,473,160	-				-0.5
4,473,160	-				-0.4
4,473,160	-				+0.5