Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4237

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
4,420,313	+		Psest_4236	0.59	-0.4
4,420,314	-		Psest_4236	0.59	+1.2
4,420,467	+		Psest_4236	0.72	-0.4
4,420,467	+		Psest_4236	0.72	-1.1
4,420,767	+				-0.8
4,420,767	+				-1.0
4,420,768	-				+0.2
4,420,974	+				+0.5
4,420,974	+				+0.8
4,420,975	-				+0.2
4,420,975	-				-0.4
4,420,975	-				+1.2
4,420,975	-				-0.8
4,420,990	-				+1.2
4,421,004	+				+1.2
4,421,005	-				+0.6
4,421,005	-				+1.2
4,421,005	-				+1.2
4,421,101	-		Psest_4237	0.10	+1.2
4,421,149	-		Psest_4237	0.13	+0.2
4,421,149	-		Psest_4237	0.13	-0.8
4,421,154	+		Psest_4237	0.14	-0.8
4,421,154	+		Psest_4237	0.14	-1.4
4,421,155	-		Psest_4237	0.14	-0.4
4,421,155	-		Psest_4237	0.14	+1.2
4,421,155	-		Psest_4237	0.14	-0.6
4,421,155	-		Psest_4237	0.14	+0.6
4,421,304	+		Psest_4237	0.24	+0.2
4,421,304	+		Psest_4237	0.24	+0.6
4,421,305	-		Psest_4237	0.24	-0.5
4,421,305	-		Psest_4237	0.24	+2.2
4,421,375	-		Psest_4237	0.29	+1.2
4,421,375	-		Psest_4237	0.29	+1.2
4,421,499	+		Psest_4237	0.38	-0.0
4,421,499	+		Psest_4237	0.38	+1.2
4,421,499	+		Psest_4237	0.38	+1.2
4,421,499	+		Psest_4237	0.38	-0.8
4,421,500	-		Psest_4237	0.38	-0.8
4,421,500	-		Psest_4237	0.38	-1.4
4,421,517	+		Psest_4237	0.39	-0.5
4,421,517	+		Psest_4237	0.39	-0.1
4,421,517	+		Psest_4237	0.39	-1.4
4,421,517	+		Psest_4237	0.39	-0.2
4,421,517	+		Psest_4237	0.39	-0.0
4,421,517	+		Psest_4237	0.39	-0.4
4,421,517	+		Psest_4237	0.39	-0.4
4,421,517	+		Psest_4237	0.39	+1.2
4,421,517	+		Psest_4237	0.39	+1.2
4,421,517	+		Psest_4237	0.39	+3.2
4,421,517	+		Psest_4237	0.39	+0.2
4,421,517	+		Psest_4237	0.39	+0.0
4,421,517	+		Psest_4237	0.39	+0.2
4,421,517	+		Psest_4237	0.39	+1.9
4,421,517	+		Psest_4237	0.39	-1.6
4,421,517	+		Psest_4237	0.39	+0.2
4,421,517	+		Psest_4237	0.39	+0.2
4,421,517	+		Psest_4237	0.39	+0.2
4,421,517	+		Psest_4237	0.39	+1.2
4,421,517	+		Psest_4237	0.39	+0.2
4,421,518	-		Psest_4237	0.39	-0.8
4,421,518	-		Psest_4237	0.39	-1.1
4,421,518	-		Psest_4237	0.39	-0.8
4,421,518	-		Psest_4237	0.39	-0.4
4,421,518	-		Psest_4237	0.39	-0.5
4,421,518	-		Psest_4237	0.39	-0.4
4,421,518	-		Psest_4237	0.39	+2.2
4,421,518	-		Psest_4237	0.39	-0.8
4,421,518	-		Psest_4237	0.39	-0.4
4,421,518	-		Psest_4237	0.39	+2.2
4,421,518	-		Psest_4237	0.39	+0.2
4,421,518	-		Psest_4237	0.39	-1.2
4,421,518	-		Psest_4237	0.39	+1.2
4,421,518	-		Psest_4237	0.39	-1.1
4,421,518	-		Psest_4237	0.39	+0.2
4,421,518	-		Psest_4237	0.39	-1.3
4,421,518	-		Psest_4237	0.39	-0.8
4,421,518	-		Psest_4237	0.39	+0.8
4,421,518	-		Psest_4237	0.39	+1.2
4,421,560	-		Psest_4237	0.42	+1.2
4,421,560	-		Psest_4237	0.42	+0.2
4,421,726	+		Psest_4237	0.53	+0.2
4,421,727	-		Psest_4237	0.53	+1.2
4,422,024	+		Psest_4237	0.74	-0.3
4,422,024	+		Psest_4237	0.74	+1.2
4,422,024	+		Psest_4237	0.74	+1.2
4,422,024	+		Psest_4237	0.74	+2.2
4,422,025	-		Psest_4237	0.74	-0.0
4,422,363	+				-1.8
4,422,363	+				+0.2
4,422,363	+				+1.2
4,422,363	+				+0.6
4,422,363	+				+0.4
4,422,363	+				-0.4
4,422,363	+				+0.5
4,422,364	-				-1.0
4,422,364	-				+1.2
4,422,364	-				+1.2
4,422,364	-				-0.8
4,422,364	-				-1.0
4,422,364	-				+0.5
4,422,364	-				+1.2
4,422,425	-				+1.6
4,422,527	+				-1.4
4,422,527	+				-0.8
4,422,528	-				+0.2
4,422,528	-				-0.1
4,422,594	+				+2.2
4,422,594	+				+1.2
4,422,594	+				+1.2
4,422,594	+				+2.2
4,422,594	+				+2.2
4,422,594	+				-0.4
4,422,595	-				+0.8
4,422,595	-				-1.3
4,422,595	-				+0.2
4,422,595	-				+1.2
4,422,595	-				+0.6
4,422,595	-				+1.2
4,422,595	-				-1.1
4,422,595	-				+1.2
4,422,635	+				-1.1
4,422,648	-				-1.6
4,422,649	+				+0.2
4,422,649	+				+1.2
4,422,649	+				+0.2
4,422,649	+				+0.2
4,422,649	+				-0.4
4,422,649	+				+2.2
4,422,649	+				+1.2
4,422,649	+				+0.2
4,422,649	+				-0.8
4,422,649	+				+0.6
4,422,649	+				+0.2
4,422,650	-				-0.6
4,422,650	-				-0.4
4,422,650	-				+2.2
4,422,650	-				+2.8
4,422,650	-				-1.0
4,422,650	-				-0.0
4,422,650	-				-0.1
4,422,650	-				+0.2
4,422,650	-				+0.2
4,422,945	+		Psest_4238	0.52	+0.2