Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4221

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
4,400,883	+				-0.1
4,400,884	-				-0.5
4,400,922	+				-0.8
4,401,020	+		Psest_4220	0.33	+0.0
4,401,079	+		Psest_4220	0.54	-0.2
4,401,208	+				-1.3
4,401,376	+		Psest_4221	0.15	+1.0
4,401,376	+		Psest_4221	0.15	-0.8
4,401,377	-		Psest_4221	0.15	-0.2
4,401,377	-		Psest_4221	0.15	+0.5
4,401,865	+		Psest_4221	0.66	+1.2
4,401,866	-		Psest_4221	0.66	+0.6
4,401,866	-		Psest_4221	0.66	+0.2
4,401,866	-		Psest_4221	0.66	+1.1
4,401,893	-		Psest_4221	0.69	+0.4
4,401,979	+		Psest_4221	0.78	+0.4
4,402,172	+				+0.5
4,402,173	-				-0.4
4,402,173	-				+0.1
4,402,280	+				+1.0
4,402,280	+				-1.0
4,402,280	+				+2.2
4,402,281	-				+1.8
4,402,281	-				+0.3
4,402,409	+				+0.3
4,402,443	+				+0.4
4,402,443	+				-0.4
4,402,443	+				-0.2
4,402,443	+				-0.2
4,402,443	+				+1.1
4,402,444	-				+0.0
4,402,444	-				-1.0
4,402,444	-				-0.3
4,402,444	-				-0.4
4,402,444	-				-0.6
4,402,444	-				-0.9
4,402,444	-				-2.1
4,402,444	-				+0.6
4,402,444	-				-1.6
4,402,500	+				+0.6
4,402,500	+				-1.1
4,402,500	+				-0.4
4,402,501	-				-0.6
4,402,501	-				-0.4
4,402,501	-				+0.1
4,402,617	-		Psest_4222	0.14	+0.2
4,402,659	+		Psest_4222	0.17	+0.1
4,402,760	+		Psest_4222	0.24	-0.7
4,402,760	+		Psest_4222	0.24	+0.7
4,402,760	+		Psest_4222	0.24	-0.8
4,402,760	+		Psest_4222	0.24	-0.8
4,402,760	+		Psest_4222	0.24	-2.0
4,402,760	+		Psest_4222	0.24	-0.4
4,402,761	-		Psest_4222	0.24	-1.4
4,402,761	-		Psest_4222	0.24	-0.2
4,402,761	-		Psest_4222	0.24	+0.7
4,402,761	-		Psest_4222	0.24	-0.5
4,402,777	-		Psest_4222	0.25	-0.7
4,402,777	-		Psest_4222	0.25	-0.8
4,402,777	-		Psest_4222	0.25	-0.7
4,402,823	+		Psest_4222	0.29	-0.8
4,402,823	+		Psest_4222	0.29	-0.7
4,402,823	+		Psest_4222	0.29	-0.6
4,402,823	+		Psest_4222	0.29	-0.4
4,402,824	-		Psest_4222	0.29	-1.1
4,402,824	-		Psest_4222	0.29	-0.4
4,402,824	-		Psest_4222	0.29	-0.7
4,402,824	-		Psest_4222	0.29	-1.2
4,402,824	-		Psest_4222	0.29	-0.9
4,402,824	-		Psest_4222	0.29	-0.8
4,402,922	+		Psest_4222	0.36	-0.1
4,402,922	+		Psest_4222	0.36	-0.6
4,402,922	+		Psest_4222	0.36	-1.1
4,402,922	+		Psest_4222	0.36	-0.2
4,402,922	+		Psest_4222	0.36	-1.0
4,402,922	+		Psest_4222	0.36	-1.2
4,402,922	+		Psest_4222	0.36	-2.1
4,402,922	+		Psest_4222	0.36	+0.7
4,402,922	+		Psest_4222	0.36	+1.2
4,402,922	+		Psest_4222	0.36	-0.6
4,402,922	+		Psest_4222	0.36	-0.2
4,402,922	+		Psest_4222	0.36	-1.4
4,402,923	-		Psest_4222	0.36	-3.1
4,402,923	-		Psest_4222	0.36	-0.7
4,402,923	-		Psest_4222	0.36	-1.6
4,402,923	-		Psest_4222	0.36	-0.9
4,402,923	-		Psest_4222	0.36	-1.5
4,402,923	-		Psest_4222	0.36	-0.9
4,402,928	+		Psest_4222	0.36	+0.1
4,402,929	-		Psest_4222	0.37	-1.7
4,402,929	-		Psest_4222	0.37	+0.9