Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4155

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
4,335,946	+				-0.0
4,335,946	+				-1.8
4,335,947	-				+0.1
4,336,049	+		Psest_4154	0.11	-0.1
4,336,049	+		Psest_4154	0.11	+0.6
4,336,049	+		Psest_4154	0.11	+0.3
4,336,049	+		Psest_4154	0.11	-0.3
4,336,049	+		Psest_4154	0.11	-1.1
4,336,050	-		Psest_4154	0.11	+0.5
4,336,476	+		Psest_4154	0.65	-0.8
4,336,476	+		Psest_4154	0.65	+1.5
4,336,476	+		Psest_4154	0.65	-0.0
4,336,476	+		Psest_4154	0.65	-0.4
4,336,477	-		Psest_4154	0.65	+0.6
4,336,690	+				+0.7
4,336,690	+				+0.9
4,336,690	+				+0.5
4,336,690	+				-1.0
4,336,691	-				-1.3
4,336,746	-				+3.0
4,336,752	+				-0.8
4,336,752	+				-0.4
4,336,752	+				+0.8
4,336,752	+				+0.9
4,336,753	-				+1.2
4,336,841	-				+1.2
4,336,898	-				+0.9
4,336,908	+				-1.0
4,336,908	+				-0.8
4,336,908	+				-0.7
4,336,908	+				+0.4
4,336,909	-				+1.0
4,336,909	-				-0.3
4,336,951	+				+0.6
4,336,952	-				-0.4
4,336,952	-				+0.7
4,336,952	-				+0.8
4,336,952	-				+0.5
4,336,952	-				+0.3
4,336,952	-				+0.1
4,337,238	+		Psest_4155	0.37	+0.9
4,337,320	+		Psest_4155	0.47	+0.5
4,337,339	+		Psest_4155	0.49	+1.4
4,337,340	-		Psest_4155	0.49	+0.8
4,337,340	-		Psest_4155	0.49	+0.3
4,337,385	+		Psest_4155	0.55	+1.2
4,337,385	+		Psest_4155	0.55	+0.9
4,337,385	+		Psest_4155	0.55	+0.2
4,337,385	+		Psest_4155	0.55	+0.0
4,337,386	-		Psest_4155	0.55	-1.3
4,337,386	-		Psest_4155	0.55	+1.8
4,337,386	-		Psest_4155	0.55	+1.8
4,337,413	-		Psest_4155	0.58	+2.2
4,337,496	+		Psest_4155	0.68	-0.1
4,337,799	+				-0.4
4,337,799	+				+2.8
4,337,928	+				+1.2
4,337,928	+				+1.2
4,337,928	+				-1.4
4,337,928	+				+0.5
4,337,928	+				-0.2
4,337,928	+				+0.8
4,337,928	+				+0.5
4,337,928	+				+1.1
4,337,928	+				-1.3
4,337,928	+				+1.4
4,337,928	+				+1.8
4,337,928	+				+1.4
4,337,928	+				-0.3
4,337,928	+				-0.2
4,337,928	+				-0.5
4,337,928	+				-1.0
4,337,929	-				+0.2
4,337,929	-				-0.1
4,337,929	-				-0.7
4,337,929	-				-0.2
4,338,028	-				-0.8
4,338,038	+				+0.2
4,338,073	+				-1.1
4,338,099	-				+0.2
4,338,233	-		Psest_4156	0.12	+0.1
4,338,263	+		Psest_4156	0.16	+0.6
4,338,263	+		Psest_4156	0.16	+0.4
4,338,264	-		Psest_4156	0.16	-0.3
4,338,264	-		Psest_4156	0.16	+1.8
4,338,359	-		Psest_4156	0.27	-0.0
4,338,359	-		Psest_4156	0.27	+0.0
4,338,390	+		Psest_4156	0.31	+0.6
4,338,391	-		Psest_4156	0.31	-0.3
4,338,391	-		Psest_4156	0.31	+0.7
4,338,409	+		Psest_4156	0.33	+0.2
4,338,409	+		Psest_4156	0.33	-1.0
4,338,409	+		Psest_4156	0.33	+1.5
4,338,409	+		Psest_4156	0.33	-0.4
4,338,409	+		Psest_4156	0.33	-0.7
4,338,475	+		Psest_4156	0.41	-0.1
4,338,476	-		Psest_4156	0.41	+0.6
4,338,493	+		Psest_4156	0.43	+0.3
4,338,493	+		Psest_4156	0.43	+0.4
4,338,494	-		Psest_4156	0.43	-0.5
4,338,494	-		Psest_4156	0.43	-1.1
4,338,494	-		Psest_4156	0.43	-0.5
4,338,701	-		Psest_4156	0.68	-1.1
4,338,701	-		Psest_4156	0.68	-1.8
4,338,701	-		Psest_4156	0.68	-0.2
4,338,701	-		Psest_4156	0.68	-0.3
4,338,701	-		Psest_4156	0.68	-1.1
4,338,701	-		Psest_4156	0.68	-0.1
4,338,701	-		Psest_4156	0.68	-0.4
4,338,701	-		Psest_4156	0.68	+0.4
4,338,701	-		Psest_4156	0.68	+0.4
4,338,701	-		Psest_4156	0.68	+0.2
4,338,701	-		Psest_4156	0.68	-1.3
4,338,701	-		Psest_4156	0.68	-0.6
4,338,701	-		Psest_4156	0.68	+0.3
4,338,701	-		Psest_4156	0.68	+0.5
4,338,701	-		Psest_4156	0.68	-1.2
4,338,701	-		Psest_4156	0.68	+0.7
4,338,701	-		Psest_4156	0.68	-0.5
4,338,701	-		Psest_4156	0.68	+0.9
4,338,733	+		Psest_4156	0.72	+0.2
4,338,733	+		Psest_4156	0.72	+0.6
4,338,733	+		Psest_4156	0.72	+0.6
4,338,733	+		Psest_4156	0.72	+0.2
4,338,733	+		Psest_4156	0.72	-0.6
4,338,733	+		Psest_4156	0.72	-0.0
4,338,733	+		Psest_4156	0.72	-0.1
4,338,733	+		Psest_4156	0.72	-0.8
4,338,734	-		Psest_4156	0.72	+0.4
4,338,734	-		Psest_4156	0.72	+0.3
4,338,734	-		Psest_4156	0.72	+0.1
4,338,734	-		Psest_4156	0.72	-0.5