Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4104

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
4,283,411	+		Psest_4103	0.78	+0.7
4,283,411	+		Psest_4103	0.78	-0.4
4,283,411	+		Psest_4103	0.78	-1.7
4,283,654	+				+0.0
4,283,654	+				+0.0
4,283,682	-				+0.6
4,283,682	-				-0.8
4,283,727	+				+0.1
4,283,728	-				+4.1
4,283,728	-				-0.4
4,283,728	-				+1.1
4,283,751	+				-0.4
4,283,752	-				+0.8
4,283,752	-				-1.4
4,283,752	-				-0.4
4,283,839	+				-0.9
4,283,839	+				+0.5
4,283,839	+				+0.0
4,283,840	-				-0.0
4,283,840	-				-2.6
4,283,840	-				+0.1
4,283,933	-				-0.4
4,284,271	+		Psest_4104	0.17	+0.1
4,284,271	+		Psest_4104	0.17	-0.2
4,284,271	+		Psest_4104	0.17	+0.4
4,284,272	-		Psest_4104	0.17	+0.1
4,284,272	-		Psest_4104	0.17	-0.3
4,284,272	-		Psest_4104	0.17	-0.1
4,284,272	-		Psest_4104	0.17	-1.2
4,284,272	-		Psest_4104	0.17	-0.9
4,284,273	+		Psest_4104	0.17	+2.7
4,284,273	+		Psest_4104	0.17	+0.1
4,284,305	+		Psest_4104	0.18	+2.1
4,284,306	-		Psest_4104	0.18	-1.7
4,284,562	+		Psest_4104	0.27	+0.7
4,284,562	+		Psest_4104	0.27	-0.4
4,284,562	+		Psest_4104	0.27	-0.2
4,284,562	+		Psest_4104	0.27	+0.5
4,284,562	+		Psest_4104	0.27	+0.3
4,284,562	+		Psest_4104	0.27	-0.3
4,284,562	+		Psest_4104	0.27	-1.2
4,284,562	+		Psest_4104	0.27	-0.4
4,284,562	+		Psest_4104	0.27	+1.1
4,284,562	+		Psest_4104	0.27	+0.7
4,284,562	+		Psest_4104	0.27	-0.4
4,284,562	+		Psest_4104	0.27	+0.1
4,284,562	+		Psest_4104	0.27	+1.7
4,284,562	+		Psest_4104	0.27	+2.1
4,284,562	+		Psest_4104	0.27	+0.4
4,284,562	+		Psest_4104	0.27	-0.0
4,284,562	+		Psest_4104	0.27	-1.0
4,284,562	+		Psest_4104	0.27	-1.0
4,284,562	+		Psest_4104	0.27	-0.7
4,284,562	+		Psest_4104	0.27	-0.4
4,284,562	+		Psest_4104	0.27	-0.3
4,284,562	+		Psest_4104	0.27	+0.6
4,284,562	+		Psest_4104	0.27	-0.3
4,284,562	+		Psest_4104	0.27	-0.4
4,284,562	+		Psest_4104	0.27	-2.3
4,284,562	+		Psest_4104	0.27	-0.2
4,284,562	+		Psest_4104	0.27	+0.1
4,284,562	+		Psest_4104	0.27	-2.6
4,284,562	+		Psest_4104	0.27	+0.1
4,284,562	+		Psest_4104	0.27	-0.7
4,284,562	+		Psest_4104	0.27	+2.1
4,284,562	+		Psest_4104	0.27	+0.1
4,284,562	+		Psest_4104	0.27	-1.9
4,284,562	+		Psest_4104	0.27	-1.0
4,284,562	+		Psest_4104	0.27	+0.4
4,284,562	+		Psest_4104	0.27	+0.1
4,284,562	+		Psest_4104	0.27	-0.2
4,284,562	+		Psest_4104	0.27	-0.8
4,284,562	+		Psest_4104	0.27	+0.7
4,284,562	+		Psest_4104	0.27	+0.6
4,284,562	+		Psest_4104	0.27	-1.2
4,284,562	+		Psest_4104	0.27	+1.1
4,284,562	+		Psest_4104	0.27	+0.3
4,284,563	-		Psest_4104	0.27	-1.4
4,284,563	-		Psest_4104	0.27	-0.2
4,284,563	-		Psest_4104	0.27	+0.8
4,284,563	-		Psest_4104	0.27	-3.4
4,284,563	-		Psest_4104	0.27	+0.3
4,284,563	-		Psest_4104	0.27	+0.1
4,284,563	-		Psest_4104	0.27	-0.1
4,284,563	-		Psest_4104	0.27	+0.1
4,284,563	-		Psest_4104	0.27	+1.1
4,284,563	-		Psest_4104	0.27	-0.3
4,284,563	-		Psest_4104	0.27	-0.4
4,284,563	-		Psest_4104	0.27	+0.3
4,284,563	-		Psest_4104	0.27	+1.1
4,284,563	-		Psest_4104	0.27	-0.9
4,284,563	-		Psest_4104	0.27	+0.1
4,284,563	-		Psest_4104	0.27	-0.8
4,284,563	-		Psest_4104	0.27	-0.4
4,284,563	-		Psest_4104	0.27	+0.1
4,284,563	-		Psest_4104	0.27	+1.0
4,284,563	-		Psest_4104	0.27	+1.0
4,284,563	-		Psest_4104	0.27	+0.3
4,284,563	-		Psest_4104	0.27	+2.7
4,284,563	-		Psest_4104	0.27	-0.9
4,284,563	-		Psest_4104	0.27	-0.4
4,284,563	-		Psest_4104	0.27	+0.9
4,284,563	-		Psest_4104	0.27	-0.4
4,284,563	-		Psest_4104	0.27	+0.1
4,284,563	-		Psest_4104	0.27	-0.2
4,284,563	-		Psest_4104	0.27	+1.1
4,284,563	-		Psest_4104	0.27	-1.0
4,284,563	-		Psest_4104	0.27	+1.1
4,284,563	-		Psest_4104	0.27	-0.5
4,284,616	+		Psest_4104	0.28	-0.2
4,284,616	+		Psest_4104	0.28	-0.9
4,284,616	+		Psest_4104	0.28	-0.1
4,284,617	-		Psest_4104	0.28	+1.1
4,284,617	-		Psest_4104	0.28	-2.2
4,284,617	-		Psest_4104	0.28	-1.0
4,284,617	-		Psest_4104	0.28	-1.7
4,284,617	-		Psest_4104	0.28	-0.4
4,284,617	-		Psest_4104	0.28	+0.6
4,284,617	-		Psest_4104	0.28	-1.4
4,284,649	+		Psest_4104	0.29	+0.1
4,284,650	-		Psest_4104	0.29	-0.8
4,284,650	-		Psest_4104	0.29	+1.6
4,284,650	-		Psest_4104	0.29	-1.0
4,284,650	-		Psest_4104	0.29	-0.2
4,284,650	-		Psest_4104	0.29	+1.1
4,284,661	+		Psest_4104	0.30	-0.4
4,284,661	+		Psest_4104	0.30	+0.3
4,284,661	+		Psest_4104	0.30	+0.9
4,284,661	+		Psest_4104	0.30	-1.2
4,284,661	+		Psest_4104	0.30	-0.2
4,284,661	+		Psest_4104	0.30	+0.3
4,284,662	-		Psest_4104	0.30	+2.1
4,284,662	-		Psest_4104	0.30	+0.1
4,284,662	-		Psest_4104	0.30	+0.1
4,284,662	-		Psest_4104	0.30	+0.8
4,284,662	-		Psest_4104	0.30	-1.2
4,284,662	-		Psest_4104	0.30	-1.2
4,284,769	+		Psest_4104	0.33	+0.1
4,284,769	+		Psest_4104	0.33	+0.7
4,284,769	+		Psest_4104	0.33	+2.1
4,284,770	-		Psest_4104	0.33	-1.4
4,284,770	-		Psest_4104	0.33	+0.1
4,284,853	+		Psest_4104	0.36	-0.6
4,284,853	+		Psest_4104	0.36	-0.9
4,284,853	+		Psest_4104	0.36	-0.4
4,284,854	-		Psest_4104	0.36	-0.3
4,284,854	-		Psest_4104	0.36	-0.9
4,284,854	-		Psest_4104	0.36	-1.0
4,284,854	-		Psest_4104	0.36	-1.4
4,284,862	+		Psest_4104	0.36	-0.7
4,284,864	+		Psest_4104	0.36	-1.1
4,284,864	+		Psest_4104	0.36	+0.6
4,284,864	+		Psest_4104	0.36	-0.9
4,284,864	+		Psest_4104	0.36	-0.3
4,284,864	+		Psest_4104	0.36	-1.0
4,284,864	+		Psest_4104	0.36	-1.2
4,284,864	+		Psest_4104	0.36	+0.7
4,284,865	-		Psest_4104	0.36	+0.6
4,284,865	-		Psest_4104	0.36	+1.1
4,284,865	-		Psest_4104	0.36	-1.4
4,284,865	-		Psest_4104	0.36	+0.4
4,284,973	+		Psest_4104	0.40	-0.4
4,284,973	+		Psest_4104	0.40	+0.6
4,284,973	+		Psest_4104	0.40	+1.1
4,284,974	-		Psest_4104	0.40	-1.4
4,284,974	-		Psest_4104	0.40	-0.6
4,284,974	-		Psest_4104	0.40	-0.4
4,284,974	-		Psest_4104	0.40	+0.4
4,284,974	-		Psest_4104	0.40	-0.9
4,284,974	-		Psest_4104	0.40	-0.4
4,284,974	-		Psest_4104	0.40	+1.1
4,284,974	-		Psest_4104	0.40	+1.5
4,285,150	+		Psest_4104	0.46	-0.4
4,285,150	+		Psest_4104	0.46	+0.1
4,285,151	-		Psest_4104	0.46	+1.1
4,285,151	-		Psest_4104	0.46	-2.2
4,285,183	+		Psest_4104	0.47	-0.1
4,285,183	+		Psest_4104	0.47	+0.3
4,285,184	-		Psest_4104	0.47	+1.4
4,285,192	+		Psest_4104	0.47	+1.1
4,285,192	+		Psest_4104	0.47	-0.1
4,285,192	+		Psest_4104	0.47	-0.1
4,285,192	+		Psest_4104	0.47	-1.0
4,285,192	+		Psest_4104	0.47	+1.7
4,285,192	+		Psest_4104	0.47	+1.1
4,285,192	+		Psest_4104	0.47	-0.9
4,285,192	+		Psest_4104	0.47	-0.9
4,285,192	+		Psest_4104	0.47	-0.7
4,285,192	+		Psest_4104	0.47	+1.4
4,285,192	+		Psest_4104	0.47	-0.4
4,285,192	+		Psest_4104	0.47	+0.1
4,285,192	+		Psest_4104	0.47	-0.9
4,285,193	-		Psest_4104	0.47	+0.3
4,285,193	-		Psest_4104	0.47	+1.7
4,285,193	-		Psest_4104	0.47	-0.4
4,285,193	-		Psest_4104	0.47	-0.7
4,285,193	-		Psest_4104	0.47	-0.2
4,285,193	-		Psest_4104	0.47	+0.1
4,285,241	-		Psest_4104	0.49	-0.7
4,285,252	+		Psest_4104	0.49	+1.1
4,285,325	-		Psest_4104	0.51	-1.0
4,285,357	+		Psest_4104	0.52	-2.0
4,285,387	+		Psest_4104	0.53	+0.3
4,285,387	+		Psest_4104	0.53	-0.6
4,285,387	+		Psest_4104	0.53	-0.4
4,285,387	+		Psest_4104	0.53	+0.3
4,285,388	-		Psest_4104	0.53	-1.4
4,285,388	-		Psest_4104	0.53	+0.1
4,285,388	-		Psest_4104	0.53	+2.1
4,285,388	-		Psest_4104	0.53	-0.3
4,285,409	-		Psest_4104	0.54	+0.0
4,285,487	-		Psest_4104	0.57	+0.4
4,285,549	+		Psest_4104	0.59	-0.7
4,285,549	+		Psest_4104	0.59	-1.4
4,285,549	+		Psest_4104	0.59	-0.9
4,285,549	+		Psest_4104	0.59	+1.0
4,285,549	+		Psest_4104	0.59	-0.4
4,285,549	+		Psest_4104	0.59	+0.1
4,285,550	-		Psest_4104	0.59	+0.2
4,285,766	-		Psest_4104	0.66	-0.6
4,285,844	-		Psest_4104	0.68	+0.7
4,285,844	-		Psest_4104	0.68	-0.7
4,285,844	-		Psest_4104	0.68	-0.7
4,285,844	-		Psest_4104	0.68	+0.0
4,285,844	-		Psest_4104	0.68	-1.0
4,285,844	-		Psest_4104	0.68	+1.5
4,285,844	-		Psest_4104	0.68	+0.1
4,285,844	-		Psest_4104	0.68	+0.6
4,285,844	-		Psest_4104	0.68	+0.1
4,286,092	+		Psest_4104	0.76	+0.0
4,286,093	-		Psest_4104	0.76	+0.5
4,286,093	-		Psest_4104	0.76	+0.6
4,286,608	+				+1.1
4,286,608	+				-0.4
4,286,609	-				+0.1
4,286,610	+				+0.8
4,286,611	-				+0.8
4,287,000	+		Psest_4105	0.19	-0.2
4,287,000	+		Psest_4105	0.19	+0.1
4,287,001	-		Psest_4105	0.19	+0.3
4,287,001	-		Psest_4105	0.19	-0.9
4,287,058	-		Psest_4105	0.25	-0.3
4,287,137	-		Psest_4105	0.34	-0.1
4,287,171	+		Psest_4105	0.37	+0.1
4,287,171	+		Psest_4105	0.37	-0.9
4,287,171	+		Psest_4105	0.37	-0.9
4,287,171	+		Psest_4105	0.37	+0.4
4,287,171	+		Psest_4105	0.37	-0.2
4,287,172	-		Psest_4105	0.37	-0.3
4,287,172	-		Psest_4105	0.37	+0.0
4,287,223	-		Psest_4105	0.43	+0.2
4,287,282	+		Psest_4105	0.49	+1.3
4,287,282	+		Psest_4105	0.49	-0.3
4,287,282	+		Psest_4105	0.49	-2.0
4,287,282	+		Psest_4105	0.49	-1.2
4,287,283	-		Psest_4105	0.49	+0.1
4,287,283	-		Psest_4105	0.49	+0.1
4,287,283	-		Psest_4105	0.49	-3.6
4,287,486	+		Psest_4105	0.71	+0.1
4,287,486	+		Psest_4105	0.71	+1.6
4,287,486	+		Psest_4105	0.71	+0.6
4,287,486	+		Psest_4105	0.71	+1.3
4,287,486	+		Psest_4105	0.71	-0.3
4,287,486	+		Psest_4105	0.71	-0.7
4,287,486	+		Psest_4105	0.71	-0.4
4,287,486	+		Psest_4105	0.71	+0.4
4,287,487	-		Psest_4105	0.71	-0.2
4,287,487	-		Psest_4105	0.71	+0.4
4,287,487	-		Psest_4105	0.71	-0.9
4,287,487	-		Psest_4105	0.71	+0.6
4,287,487	-		Psest_4105	0.71	-0.4
4,287,487	-		Psest_4105	0.71	+0.6
4,287,487	-		Psest_4105	0.71	+0.6
4,287,487	-		Psest_4105	0.71	+0.6
4,287,487	-		Psest_4105	0.71	+0.0
4,287,487	-		Psest_4105	0.71	+0.1
4,287,487	-		Psest_4105	0.71	+1.1
4,287,519	+		Psest_4105	0.74	-0.9
4,287,520	-		Psest_4105	0.75	-0.7