Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3911

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
4,078,816	+		Psest_3909	0.82	+0.6
4,079,164	+				+0.8
4,079,165	-				-1.2
4,079,165	-				+0.5
4,079,367	-		Psest_3910	0.38	+0.7
4,079,367	-		Psest_3910	0.38	+2.1
4,079,455	-		Psest_3910	0.57	-0.9
4,079,617	-				+0.1
4,079,745	+				+0.3
4,079,826	+				+0.5
4,079,826	+				+1.1
4,079,826	+				-1.2
4,079,827	-				+0.9
4,079,873	-		Psest_3911	0.11	+2.1
4,079,923	-		Psest_3911	0.15	+1.7
4,080,263	+		Psest_3911	0.40	-1.2
4,080,263	+		Psest_3911	0.40	-0.7
4,080,263	+		Psest_3911	0.40	-2.1
4,080,263	+		Psest_3911	0.40	-0.5
4,080,263	+		Psest_3911	0.40	-0.2
4,080,264	-		Psest_3911	0.40	-1.4
4,080,264	-		Psest_3911	0.40	-0.9
4,080,264	-		Psest_3911	0.40	-0.2
4,080,264	-		Psest_3911	0.40	-0.5
4,080,264	-		Psest_3911	0.40	-0.7
4,080,434	-		Psest_3911	0.52	-0.1
4,080,434	-		Psest_3911	0.52	-2.1
4,081,296	+		Psest_3912	0.14	+0.1
4,081,489	-		Psest_3912	0.27	+2.1