Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3905

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
4,072,926	-		Psest_3904	0.13	-1.2
4,073,471	+		Psest_3904	0.67	-0.5
4,073,735	+				+2.1
4,073,897	-				+1.1
4,073,897	-				+1.1
4,074,436	-		Psest_3905	0.31	+1.1
4,074,983	-		Psest_3905	0.57	+2.7
4,075,551	+		Psest_3905	0.84	+0.1
4,075,551	+		Psest_3905	0.84	+1.8
4,075,551	+		Psest_3905	0.84	+0.5
4,075,551	+		Psest_3905	0.84	+0.1
4,075,551	+		Psest_3905	0.84	+0.8
4,075,551	+		Psest_3905	0.84	+0.1
4,075,552	-		Psest_3905	0.84	+1.7
4,075,552	-		Psest_3905	0.84	+0.1
4,075,555	+		Psest_3905	0.84	+1.1
4,075,555	+		Psest_3905	0.84	+1.1
4,075,760	+				+1.1
4,075,761	-				-0.9
4,075,761	-				+1.1
4,075,865	+				+1.1
4,075,866	-				+0.1
4,075,866	-				-0.7
4,075,866	-				+1.9
4,075,866	-				+2.7
4,075,866	-				+1.1
4,075,936	+				+0.1
4,076,092	+		Psest_3906	0.30	+1.3
4,076,092	+		Psest_3906	0.30	+1.1
4,076,092	+		Psest_3906	0.30	+0.1
4,076,092	+		Psest_3906	0.30	+1.5
4,076,092	+		Psest_3906	0.30	+1.1
4,076,092	+		Psest_3906	0.30	+0.3
4,076,092	+		Psest_3906	0.30	-0.9
4,076,092	+		Psest_3906	0.30	+0.5
4,076,092	+		Psest_3906	0.30	+0.8
4,076,092	+		Psest_3906	0.30	-0.2
4,076,122	+		Psest_3906	0.36	-0.7
4,076,122	+		Psest_3906	0.36	+0.5
4,076,122	+		Psest_3906	0.36	+3.1
4,076,122	+		Psest_3906	0.36	-0.5
4,076,122	+		Psest_3906	0.36	+1.1
4,076,122	+		Psest_3906	0.36	+0.7
4,076,122	+		Psest_3906	0.36	+0.1
4,076,122	+		Psest_3906	0.36	+0.5
4,076,122	+		Psest_3906	0.36	+0.6
4,076,123	-		Psest_3906	0.36	-1.5
4,076,123	-		Psest_3906	0.36	+1.1
4,076,123	-		Psest_3906	0.36	-0.5
4,076,123	-		Psest_3906	0.36	+1.1
4,076,123	-		Psest_3906	0.36	-0.5
4,076,123	-		Psest_3906	0.36	+1.1
4,076,123	-		Psest_3906	0.36	+1.1
4,076,339	-		Psest_3906	0.77	+1.1
4,076,339	-		Psest_3906	0.77	-0.5
4,076,459	+				-0.9
4,076,460	-				+1.5
4,076,460	-				-1.2
4,076,811	+		Psest_3907	0.26	+0.1
4,076,811	+		Psest_3907	0.26	+1.1
4,076,811	+		Psest_3907	0.26	+0.1
4,076,811	+		Psest_3907	0.26	+0.1
4,076,811	+		Psest_3907	0.26	+0.5
4,076,811	+		Psest_3907	0.26	-0.5
4,076,811	+		Psest_3907	0.26	+1.1
4,076,811	+		Psest_3907	0.26	-0.5
4,076,811	+		Psest_3907	0.26	+2.7
4,076,811	+		Psest_3907	0.26	+0.1
4,076,811	+		Psest_3907	0.26	-1.5
4,076,811	+		Psest_3907	0.26	+0.1
4,076,811	+		Psest_3907	0.26	-0.7
4,076,812	-		Psest_3907	0.26	-1.5
4,076,812	-		Psest_3907	0.26	-1.5
4,076,812	-		Psest_3907	0.26	+0.1
4,076,812	-		Psest_3907	0.26	+0.1
4,076,812	-		Psest_3907	0.26	+1.7
4,076,812	-		Psest_3907	0.26	+0.6
4,076,812	-		Psest_3907	0.26	-0.1
4,076,812	-		Psest_3907	0.26	+1.1
4,076,812	-		Psest_3907	0.26	+1.5
4,076,812	-		Psest_3907	0.26	+2.1
4,076,812	-		Psest_3907	0.26	-0.5
4,076,812	-		Psest_3907	0.26	-0.5
4,076,812	-		Psest_3907	0.26	+1.1
4,076,812	-		Psest_3907	0.26	-0.8
4,076,812	-		Psest_3907	0.26	+1.7
4,076,812	-		Psest_3907	0.26	+0.1
4,076,812	-		Psest_3907	0.26	+1.1
4,076,812	-		Psest_3907	0.26	+1.1
4,076,812	-		Psest_3907	0.26	+1.7
4,076,812	-		Psest_3907	0.26	+1.1
4,076,812	-		Psest_3907	0.26	+0.1
4,076,812	-		Psest_3907	0.26	-0.3
4,076,812	-		Psest_3907	0.26	-0.7