Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3737

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,908,839	+		Psest_3735	0.69	-0.2
3,908,840	-		Psest_3735	0.69	-0.6
3,908,958	-				+0.6
3,908,971	+				+0.2
3,908,971	+				+0.3
3,908,971	+				-0.0
3,908,972	-				+0.1
3,908,972	-				+0.2
3,908,972	-				+0.0
3,908,972	-				+0.0
3,908,972	-				-1.3
3,908,972	-				-0.1
3,908,972	-				-0.4
3,908,972	-				+1.4
3,909,305	+		Psest_3736	0.69	+0.1
3,909,306	-		Psest_3736	0.69	-0.5
3,909,306	-		Psest_3736	0.69	-0.1
3,909,464	-				+0.1
3,909,464	-				+0.5
3,909,593	+		Psest_3737	0.21	+1.8
3,909,593	+		Psest_3737	0.21	+1.3
3,909,593	+		Psest_3737	0.21	+0.2
3,909,594	-		Psest_3737	0.21	+0.8
3,909,594	-		Psest_3737	0.21	+0.7
3,909,594	-		Psest_3737	0.21	+0.8
3,909,594	-		Psest_3737	0.21	+0.4
3,909,594	-		Psest_3737	0.21	+0.4
3,909,594	-		Psest_3737	0.21	-0.5
3,909,647	+		Psest_3737	0.30	+0.8
3,909,648	-		Psest_3737	0.30	+0.2
3,909,648	-		Psest_3737	0.30	-0.7
3,909,974	+		Psest_3737	0.81	+1.0
3,910,251	+				-1.8
3,910,257	+				+1.0
3,910,258	-				+0.0
3,910,258	-				+0.6
3,910,302	+				+1.5
3,910,407	-				+0.2
3,910,427	+				+0.3
3,910,427	+				+0.0
3,910,894	+		Psest_3739	0.84	+3.4
3,910,894	+		Psest_3739	0.84	+1.5
3,910,894	+		Psest_3739	0.84	+1.5
3,910,894	+		Psest_3739	0.84	+0.2
3,910,894	+		Psest_3739	0.84	-0.4
3,910,894	+		Psest_3739	0.84	+1.9
3,910,898	+		Psest_3739	0.85	+0.6
3,910,898	+		Psest_3739	0.85	-1.4
3,910,898	+		Psest_3739	0.85	-0.5
3,910,898	+		Psest_3739	0.85	+0.0
3,910,898	+		Psest_3739	0.85	+0.8
3,910,898	+		Psest_3739	0.85	-0.1
3,910,899	-		Psest_3739	0.85	+1.2
3,910,899	-		Psest_3739	0.85	+0.8