Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3641

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,801,827	-				-0.1
3,801,827	-				+0.6
3,801,896	+				-0.9
3,801,897	-				+0.5
3,801,897	-				-0.7
3,802,454	+				+1.2
3,802,454	+				-1.0
3,802,454	+				+0.7
3,802,455	-				-0.5
3,802,455	-				+0.6
3,802,455	-				+1.6
3,802,455	-				+0.0
3,802,471	+				-0.6
3,802,471	+				+0.3
3,802,472	-				+0.2
3,802,472	-				+0.4
3,802,634	+		Psest_3641	0.15	+1.2
3,802,669	-		Psest_3641	0.18	-0.0
3,802,672	+		Psest_3641	0.19	+1.1
3,802,672	+		Psest_3641	0.19	-0.1
3,802,673	-		Psest_3641	0.19	-0.8
3,802,673	-		Psest_3641	0.19	+0.8
3,802,673	-		Psest_3641	0.19	-0.0
3,802,673	-		Psest_3641	0.19	+0.3
3,802,673	-		Psest_3641	0.19	+0.4
3,802,673	-		Psest_3641	0.19	+0.4
3,802,673	-		Psest_3641	0.19	-0.0
3,802,816	-		Psest_3641	0.34	-0.2
3,802,816	-		Psest_3641	0.34	+0.4
3,802,816	-		Psest_3641	0.34	+2.2
3,802,816	-		Psest_3641	0.34	-0.1
3,802,829	+		Psest_3641	0.35	+0.2
3,802,829	+		Psest_3641	0.35	+0.5
3,802,829	+		Psest_3641	0.35	+2.3
3,802,829	+		Psest_3641	0.35	+0.3
3,802,829	+		Psest_3641	0.35	+0.2
3,802,829	+		Psest_3641	0.35	+0.0
3,802,829	+		Psest_3641	0.35	+0.7
3,802,830	-		Psest_3641	0.35	-0.4
3,802,830	-		Psest_3641	0.35	+0.1
3,802,830	-		Psest_3641	0.35	-0.4
3,802,830	-		Psest_3641	0.35	-0.6
3,802,830	-		Psest_3641	0.35	+1.2
3,802,830	-		Psest_3641	0.35	+0.2
3,802,830	-		Psest_3641	0.35	+0.9
3,802,830	-		Psest_3641	0.35	+1.4
3,802,830	-		Psest_3641	0.35	-0.2
3,802,830	-		Psest_3641	0.35	-0.3
3,802,830	-		Psest_3641	0.35	+0.8
3,802,869	+		Psest_3641	0.39	-0.2
3,802,869	+		Psest_3641	0.39	+1.2
3,802,870	-		Psest_3641	0.39	-0.1
3,802,949	-		Psest_3641	0.48	+0.9
3,803,000	+		Psest_3641	0.53	+0.4
3,803,000	+		Psest_3641	0.53	+0.8
3,803,001	-		Psest_3641	0.53	+0.6
3,803,001	-		Psest_3641	0.53	+0.5
3,803,001	-		Psest_3641	0.53	+0.4
3,803,001	-		Psest_3641	0.53	+0.6
3,803,041	+		Psest_3641	0.57	+0.2
3,803,042	-		Psest_3641	0.57	-0.8
3,803,060	+		Psest_3641	0.59	-0.7
3,803,060	+		Psest_3641	0.59	-0.3
3,803,061	-		Psest_3641	0.59	+0.3
3,803,070	+		Psest_3641	0.60	+0.5
3,803,070	+		Psest_3641	0.60	+0.9
3,803,070	+		Psest_3641	0.60	+0.5
3,803,070	+		Psest_3641	0.60	+0.7
3,803,071	-		Psest_3641	0.61	+0.7
3,803,071	-		Psest_3641	0.61	+0.3
3,803,071	-		Psest_3641	0.61	+0.6
3,803,071	-		Psest_3641	0.61	+0.9
3,803,283	+		Psest_3641	0.83	+0.4
3,803,284	-		Psest_3641	0.83	+0.5
3,803,284	-		Psest_3641	0.83	+1.5
3,803,446	+				+0.5
3,803,610	+				+1.4
3,803,702	+		Psest_3642	0.16	+0.6
3,803,703	-		Psest_3642	0.16	+0.5
3,803,921	-		Psest_3642	0.31	+0.6
3,803,976	-		Psest_3642	0.35	+0.1
3,804,030	+		Psest_3642	0.38	+1.9
3,804,031	-		Psest_3642	0.38	+0.5
3,804,031	-		Psest_3642	0.38	-0.5
3,804,031	-		Psest_3642	0.38	+1.2
3,804,031	-		Psest_3642	0.38	+0.9
3,804,031	-		Psest_3642	0.38	+0.9
3,804,039	+		Psest_3642	0.39	+0.7
3,804,039	+		Psest_3642	0.39	+0.2
3,804,040	-		Psest_3642	0.39	-0.8
3,804,040	-		Psest_3642	0.39	+0.3
3,804,040	-		Psest_3642	0.39	-1.1
3,804,304	+		Psest_3642	0.57	+0.6
3,804,304	+		Psest_3642	0.57	-0.6
3,804,404	+		Psest_3642	0.63	+0.7
3,804,405	-		Psest_3642	0.64	+1.5
3,804,405	-		Psest_3642	0.64	+0.8
3,804,438	-		Psest_3642	0.66	+0.3