Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3573

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,746,196	+				-0.5
3,746,248	-				-0.0
3,747,156	-				-0.1
3,747,396	-		Psest_3573	0.29	+2.3
3,747,396	-		Psest_3573	0.29	+1.8
3,747,396	-		Psest_3573	0.29	-0.5
3,747,608	-		Psest_3573	0.53	+1.3
3,747,840	-		Psest_3573	0.79	+1.4
3,747,840	-		Psest_3573	0.79	+0.7
3,747,843	-		Psest_3573	0.79	+0.3
3,747,843	-		Psest_3573	0.79	+3.0
3,747,843	-		Psest_3573	0.79	-0.2
3,747,846	-		Psest_3573	0.80	+2.1
3,747,846	-		Psest_3573	0.80	+0.4
3,747,846	-		Psest_3573	0.80	+0.9
3,748,039	-				+1.9
3,748,039	-				+0.5
3,748,039	-				+0.2
3,748,039	-				+0.8
3,748,039	-				-0.1
3,748,039	-				-0.3
3,748,560	-				+0.5
3,748,616	-				+0.5
3,748,616	-				-0.0
3,748,755	-				-1.0
3,748,869	+		Psest_3575	0.13	-0.2
3,748,877	+		Psest_3575	0.13	+0.6
3,748,877	+		Psest_3575	0.13	-0.2
3,748,877	+		Psest_3575	0.13	+0.2
3,748,877	+		Psest_3575	0.13	+0.3
3,748,877	+		Psest_3575	0.13	-0.2
3,748,877	+		Psest_3575	0.13	-0.0
3,748,878	-		Psest_3575	0.13	+1.2
3,748,878	-		Psest_3575	0.13	-0.0
3,748,878	-		Psest_3575	0.13	-0.1
3,748,878	-		Psest_3575	0.13	+0.7
3,748,878	-		Psest_3575	0.13	-0.1
3,748,878	-		Psest_3575	0.13	+0.6
3,748,878	-		Psest_3575	0.13	+0.4
3,748,878	-		Psest_3575	0.13	+0.4
3,748,878	-		Psest_3575	0.13	-0.6