Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3556

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,732,949	+		Psest_3554	0.86	+1.0
3,732,949	+		Psest_3554	0.86	-0.0
3,732,949	+		Psest_3554	0.86	+1.4
3,732,950	-		Psest_3554	0.87	-0.6
3,732,950	-		Psest_3554	0.87	-0.9
3,732,950	-		Psest_3554	0.87	-1.0
3,733,067	+				+2.0
3,733,068	-				-0.0
3,733,119	+		Psest_3555	0.18	-0.0
3,733,394	+		Psest_3555	0.60	+0.7
3,733,394	+		Psest_3555	0.60	+0.4
3,733,395	-		Psest_3555	0.60	-0.0
3,733,395	-		Psest_3555	0.60	-0.0
3,733,433	-		Psest_3555	0.66	-0.0
3,733,462	+		Psest_3555	0.70	+0.2
3,733,463	-		Psest_3555	0.70	+1.0
3,733,561	+		Psest_3555	0.85	-0.6
3,733,654	+				-2.0
3,733,655	-				+1.6
3,733,948	+		Psest_3556	0.53	-0.9
3,733,948	+		Psest_3556	0.53	+0.3
3,733,948	+		Psest_3556	0.53	-0.4
3,733,948	+		Psest_3556	0.53	-1.8
3,733,948	+		Psest_3556	0.53	-0.2
3,733,949	-		Psest_3556	0.53	+1.0
3,733,949	-		Psest_3556	0.53	-1.6
3,733,962	+		Psest_3556	0.55	-0.3
3,733,962	+		Psest_3556	0.55	-0.6
3,733,963	-		Psest_3556	0.56	-0.6
3,734,011	-		Psest_3556	0.65	-1.3
3,734,137	+		Psest_3556	0.89	-1.2
3,734,156	+				-0.3
3,734,156	+				-0.3
3,734,157	-				-1.6
3,734,234	-				+0.4
3,734,288	+		Psest_3557	0.27	+1.0
3,734,289	-		Psest_3557	0.27	+3.0
3,734,395	-		Psest_3557	0.71	+2.0
3,734,407	-		Psest_3557	0.76	-0.0
3,734,407	-		Psest_3557	0.76	-0.0
3,734,408	+		Psest_3557	0.77	+0.2
3,734,408	+		Psest_3557	0.77	+2.0
3,734,409	-		Psest_3557	0.77	+0.8
3,734,409	-		Psest_3557	0.77	+1.0
3,734,428	+		Psest_3557	0.85	-0.0
3,734,428	+		Psest_3557	0.85	-1.3
3,734,428	+		Psest_3557	0.85	-0.3
3,734,428	+		Psest_3557	0.85	+0.4
3,734,428	+		Psest_3557	0.85	+0.2
3,734,428	+		Psest_3557	0.85	+1.6
3,734,429	-		Psest_3557	0.85	+0.4
3,734,429	-		Psest_3557	0.85	+1.4
3,734,429	-		Psest_3557	0.85	-0.0
3,734,632	-		Psest_3558	0.16	+0.8
3,734,709	+		Psest_3558	0.23	+1.0