Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3546

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,725,401	+				+2.0
3,725,402	-				+0.2
3,725,402	-				+1.0
3,725,445	+				-0.0
3,725,446	-				+0.6
3,725,446	-				+1.0
3,725,488	+				+1.0
3,725,489	-				-0.4
3,725,765	+		Psest_3545	0.43	-0.6
3,725,878	+		Psest_3545	0.60	-0.3
3,725,879	-		Psest_3545	0.60	-0.6
3,725,908	+		Psest_3545	0.65	+1.0
3,725,908	+		Psest_3545	0.65	-0.0
3,725,908	+		Psest_3545	0.65	-0.4
3,725,909	-		Psest_3545	0.65	-0.4
3,725,909	-		Psest_3545	0.65	-0.6
3,726,129	-				-0.0
3,726,138	+				+0.5
3,726,138	+				+0.3
3,726,139	-				-0.1
3,726,139	-				+0.6
3,726,139	-				-0.4
3,726,139	-				-0.0
3,726,139	-				-0.9
3,726,139	-				+0.6
3,726,590	+		Psest_3546	0.74	+0.4
3,726,591	-		Psest_3546	0.74	+0.7