Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3519

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,697,632	+				-1.0
3,697,678	-				-0.6
3,697,678	-				-0.6
3,697,678	-				+0.3
3,697,852	-				-0.3
3,697,925	-				-0.4
3,698,268	+		Psest_3518	0.76	+0.4
3,698,269	-		Psest_3518	0.77	+1.5
3,698,376	+				-0.0
3,698,377	-				+2.2
3,698,434	-				-0.0
3,698,477	-				-1.1
3,698,616	+				-0.6
3,698,616	+				+0.1
3,698,723	+		Psest_3519	0.26	+1.2
3,698,723	+		Psest_3519	0.26	-0.2
3,698,724	-		Psest_3519	0.26	+2.0
3,698,724	-		Psest_3519	0.26	-0.2
3,699,088	-				-0.0
3,699,117	+				+0.8
3,699,117	+				+0.4
3,699,118	-				+0.8
3,699,118	-				-0.6
3,699,118	-				-0.5
3,699,118	-				+0.5
3,699,173	+				+1.3
3,699,572	+		Psest_3520	0.32	+1.6
3,699,713	+		Psest_3520	0.43	-0.0
3,699,713	+		Psest_3520	0.43	+0.4
3,699,713	+		Psest_3520	0.43	-0.7
3,699,713	+		Psest_3520	0.43	+0.6
3,699,713	+		Psest_3520	0.43	+0.5
3,699,713	+		Psest_3520	0.43	+1.0
3,699,714	-		Psest_3520	0.43	-0.8
3,699,714	-		Psest_3520	0.43	+0.2
3,699,714	-		Psest_3520	0.43	-0.9
3,699,714	-		Psest_3520	0.43	+0.1
3,700,017	-		Psest_3520	0.65	+0.4