Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3490

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,662,393	+		Psest_3489	0.65	+0.3
3,662,393	+		Psest_3489	0.65	-0.6
3,662,393	+		Psest_3489	0.65	-0.1
3,662,393	+		Psest_3489	0.65	+0.9
3,663,204	+				+0.9
3,663,390	+				-1.0
3,663,391	-				-0.1
3,663,459	+		Psest_3490	0.13	+0.5
3,663,820	-		Psest_3490	0.31	+1.8
3,663,820	-		Psest_3490	0.31	-0.3
3,663,984	+		Psest_3490	0.40	-0.5
3,664,080	+		Psest_3490	0.44	+1.2
3,664,237	-		Psest_3490	0.52	-0.8
3,664,949	+		Psest_3490	0.88	+0.7
3,664,980	+		Psest_3490	0.89	+0.9
3,665,124	+				-1.1
3,665,125	-				+1.7
3,665,125	-				+0.9
3,665,125	-				-1.9
3,665,125	-				+0.6
3,665,883	-				-0.1
3,665,939	+				+0.3
3,665,939	+				+1.9
3,665,940	-				+0.1
3,665,940	-				+0.3
3,665,967	+				-0.1
3,666,092	+		Psest_3492	0.18	-0.4
3,666,092	+		Psest_3492	0.18	-0.4
3,666,093	-		Psest_3492	0.18	-0.8
3,666,093	-		Psest_3492	0.18	-0.3
3,666,093	-		Psest_3492	0.18	+1.1