Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3467

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,637,290	+		Psest_3466	0.56	+0.9
3,637,290	+		Psest_3466	0.56	+1.6
3,637,291	-		Psest_3466	0.56	-0.9
3,637,324	-		Psest_3466	0.58	-0.1
3,637,324	-		Psest_3466	0.58	+0.2
3,637,443	+		Psest_3466	0.64	+0.4
3,637,443	+		Psest_3466	0.64	-0.7
3,637,476	+		Psest_3466	0.66	-0.6
3,637,477	-		Psest_3466	0.66	-0.6
3,637,533	+		Psest_3466	0.69	-0.7
3,637,533	+		Psest_3466	0.69	-0.5
3,637,534	-		Psest_3466	0.69	+0.0
3,637,534	-		Psest_3466	0.69	-0.1
3,637,534	-		Psest_3466	0.69	-0.8
3,637,534	-		Psest_3466	0.69	-0.1
3,637,535	+		Psest_3466	0.69	-0.9
3,637,535	+		Psest_3466	0.69	-0.1
3,637,535	+		Psest_3466	0.69	-0.1
3,637,536	-		Psest_3466	0.69	+0.3
3,637,536	-		Psest_3466	0.69	+0.6
3,637,536	-		Psest_3466	0.69	+0.2
3,637,540	-		Psest_3466	0.69	-0.7
3,637,596	+		Psest_3466	0.72	+0.0
3,637,596	+		Psest_3466	0.72	-1.8
3,637,596	+		Psest_3466	0.72	-0.3
3,637,596	+		Psest_3466	0.72	+0.9
3,637,597	-		Psest_3466	0.72	-0.5
3,637,597	-		Psest_3466	0.72	+0.5
3,637,597	-		Psest_3466	0.72	+0.7
3,637,628	+		Psest_3466	0.73	+0.9
3,637,659	-		Psest_3466	0.75	-0.9
3,637,728	+		Psest_3466	0.79	-0.1
3,637,729	-		Psest_3466	0.79	+1.6
3,637,749	+		Psest_3466	0.80	-0.7
3,637,750	-		Psest_3466	0.80	-0.1
3,637,750	-		Psest_3466	0.80	+0.6
3,637,842	+		Psest_3466	0.84	-1.7
3,637,842	+		Psest_3466	0.84	+2.1
3,637,842	+		Psest_3466	0.84	+0.4
3,637,842	+		Psest_3466	0.84	-0.4
3,637,842	+		Psest_3466	0.84	+0.1
3,637,843	-		Psest_3466	0.84	-0.7
3,637,843	-		Psest_3466	0.84	-0.5
3,637,843	-		Psest_3466	0.84	-1.4
3,637,843	-		Psest_3466	0.84	-0.5
3,637,914	+		Psest_3466	0.88	+0.7
3,637,914	+		Psest_3466	0.88	-1.3
3,637,915	-		Psest_3466	0.88	-0.9
3,637,915	-		Psest_3466	0.88	+0.2
3,637,915	-		Psest_3466	0.88	+0.6
3,638,042	-				-0.7
3,638,058	+				-0.5
3,638,077	-				-0.1
3,638,274	+		Psest_3467	0.12	-1.9
3,638,324	+		Psest_3467	0.18	-0.4
3,638,325	-		Psest_3467	0.18	-0.7
3,638,325	-		Psest_3467	0.18	-0.4
3,638,325	-		Psest_3467	0.18	+0.2
3,638,325	-		Psest_3467	0.18	-1.1
3,638,490	-		Psest_3467	0.41	-0.7
3,638,723	-		Psest_3467	0.72	-0.8
3,638,817	+		Psest_3467	0.85	+0.7
3,638,817	+		Psest_3467	0.85	-0.9
3,638,817	+		Psest_3467	0.85	-1.3
3,638,818	-		Psest_3467	0.85	+0.9
3,638,818	-		Psest_3467	0.85	-0.4
3,638,818	-		Psest_3467	0.85	-1.1
3,638,873	+				-0.4
3,638,901	+				+0.9
3,638,924	+				-1.0
3,639,139	+		Psest_3468	0.47	-0.1
3,639,139	+		Psest_3468	0.47	+0.4
3,639,139	+		Psest_3468	0.47	-1.5
3,639,140	-		Psest_3468	0.47	-0.6
3,639,140	-		Psest_3468	0.47	-0.8
3,639,140	-		Psest_3468	0.47	+0.6
3,639,140	-		Psest_3468	0.47	-0.3
3,639,140	-		Psest_3468	0.47	+0.3
3,639,155	+		Psest_3468	0.51	+0.3
3,639,155	+		Psest_3468	0.51	+0.5
3,639,155	+		Psest_3468	0.51	-0.9
3,639,155	+		Psest_3468	0.51	+0.7
3,639,155	+		Psest_3468	0.51	-0.3
3,639,156	-		Psest_3468	0.52	-0.8
3,639,156	-		Psest_3468	0.52	-1.3
3,639,156	-		Psest_3468	0.52	+1.1
3,639,156	-		Psest_3468	0.52	-0.7
3,639,156	-		Psest_3468	0.52	-1.4
3,639,156	-		Psest_3468	0.52	-1.1
3,639,157	+		Psest_3468	0.52	-0.7
3,639,157	+		Psest_3468	0.52	-0.1
3,639,158	-		Psest_3468	0.52	+0.4
3,639,158	-		Psest_3468	0.52	-2.1
3,639,158	-		Psest_3468	0.52	+0.0
3,639,158	-		Psest_3468	0.52	-0.4
3,639,460	-				-0.1
3,639,524	+				-0.5
3,639,524	+				-0.1
3,639,525	-				-0.7
3,639,562	+				-2.7
3,639,563	-				-0.1
3,639,563	-				-1.1
3,639,563	-				+0.5
3,639,563	-				-0.1
3,639,563	-				-2.2
3,639,564	+				-0.1
3,639,564	+				-0.1
3,639,564	+				-0.2
3,639,564	+				-0.1
3,639,564	+				+0.1
3,639,564	+				-0.5
3,639,565	-				+0.0
3,639,565	-				-0.1
3,639,565	-				+0.4
3,639,565	-				+0.0
3,639,565	-				+0.6
3,639,679	-		Psest_3469	0.15	-0.7
3,639,879	+		Psest_3469	0.36	-0.3