Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3355

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,523,446	+				-0.2
3,523,885	+		Psest_3354	0.47	+1.8
3,523,928	+		Psest_3354	0.51	+0.1
3,523,928	+		Psest_3354	0.51	+0.1
3,524,279	+		Psest_3354	0.89	+0.2
3,524,279	+		Psest_3354	0.89	-0.6
3,524,279	+		Psest_3354	0.89	-0.4
3,524,279	+		Psest_3354	0.89	-1.2
3,524,279	+		Psest_3354	0.89	-1.7
3,524,279	+		Psest_3354	0.89	+0.0
3,524,279	+		Psest_3354	0.89	+1.4
3,524,279	+		Psest_3354	0.89	-0.6
3,524,279	+		Psest_3354	0.89	+1.6
3,524,280	-		Psest_3354	0.89	+0.3
3,524,889	+		Psest_3355	0.18	-0.4
3,525,517	-		Psest_3355	0.39	-2.2
3,525,608	+		Psest_3355	0.42	+0.8
3,525,608	+		Psest_3355	0.42	+0.5
3,525,609	-		Psest_3355	0.43	+1.0
3,525,609	-		Psest_3355	0.43	-0.7
3,525,609	-		Psest_3355	0.43	+0.5
3,525,609	-		Psest_3355	0.43	+0.4
3,525,609	-		Psest_3355	0.43	+1.8
3,525,844	-		Psest_3355	0.51	+0.4
3,526,985	+				-1.5
3,526,986	-				+0.9
3,526,986	-				-1.0
3,527,235	+				+0.4
3,527,235	+				+0.8
3,527,236	-				+0.7
3,527,236	-				-0.8
3,527,236	-				-0.5
3,527,388	-				+0.8
3,527,394	+				+0.4
3,527,395	-				+0.3
3,527,423	+				-0.3
3,527,424	-				-1.7
3,527,424	-				-1.2
3,527,501	+				-0.2
3,527,501	+				+2.3
3,527,501	+				+0.0
3,527,501	+				+0.8
3,527,502	-				+0.0
3,527,502	-				+1.3
3,527,502	-				-1.0
3,527,502	-				-2.0
3,527,502	-				+0.3
3,527,502	-				+0.5
3,527,502	-				+0.8
3,527,502	-				-0.9
3,527,672	+		Psest_3356	0.23	-1.4
3,527,672	+		Psest_3356	0.23	+0.4
3,527,846	+		Psest_3356	0.40	-0.7
3,528,185	+		Psest_3356	0.75	-1.7
3,528,185	+		Psest_3356	0.75	+3.7
3,528,185	+		Psest_3356	0.75	-0.7
3,528,185	+		Psest_3356	0.75	-0.9
3,528,186	-		Psest_3356	0.75	+0.8
3,528,186	-		Psest_3356	0.75	-0.4
3,528,186	-		Psest_3356	0.75	-2.3
3,528,186	-		Psest_3356	0.75	+0.2
3,528,186	-		Psest_3356	0.75	-3.2