Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3338

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,501,877	+		Psest_3337	0.17	-0.5
3,501,878	-		Psest_3337	0.17	+0.2
3,501,878	-		Psest_3337	0.17	-0.1
3,502,038	+		Psest_3337	0.34	-0.0
3,502,069	+		Psest_3337	0.37	-0.6
3,502,070	-		Psest_3337	0.37	+0.2
3,502,114	+		Psest_3337	0.42	-0.2
3,502,115	-		Psest_3337	0.42	+0.7
3,502,210	+		Psest_3337	0.52	-0.1
3,502,210	+		Psest_3337	0.52	+0.0
3,502,210	+		Psest_3337	0.52	+0.4
3,502,210	+		Psest_3337	0.52	-0.3
3,502,210	+		Psest_3337	0.52	-1.2
3,502,210	+		Psest_3337	0.52	-1.2
3,502,210	+		Psest_3337	0.52	-0.6
3,502,210	+		Psest_3337	0.52	-0.3
3,502,210	+		Psest_3337	0.52	+0.4
3,502,210	+		Psest_3337	0.52	-0.2
3,502,210	+		Psest_3337	0.52	+0.8
3,502,210	+		Psest_3337	0.52	+2.8
3,502,210	+		Psest_3337	0.52	-0.3
3,502,210	+		Psest_3337	0.52	-0.1
3,502,210	+		Psest_3337	0.52	+0.1
3,502,210	+		Psest_3337	0.52	-2.5
3,502,210	+		Psest_3337	0.52	+1.0
3,502,210	+		Psest_3337	0.52	-0.7
3,502,210	+		Psest_3337	0.52	-0.2
3,502,210	+		Psest_3337	0.52	-0.8
3,502,211	-		Psest_3337	0.52	-0.0
3,502,211	-		Psest_3337	0.52	+0.7
3,502,211	-		Psest_3337	0.52	-0.6
3,502,211	-		Psest_3337	0.52	-0.5
3,502,211	-		Psest_3337	0.52	-1.2
3,502,211	-		Psest_3337	0.52	-1.2
3,502,211	-		Psest_3337	0.52	+0.3
3,502,211	-		Psest_3337	0.52	-2.0
3,502,211	-		Psest_3337	0.52	-0.2
3,502,211	-		Psest_3337	0.52	-0.2
3,502,211	-		Psest_3337	0.52	+0.5
3,502,211	-		Psest_3337	0.52	+0.1
3,502,211	-		Psest_3337	0.52	+0.4
3,502,211	-		Psest_3337	0.52	-0.8
3,502,211	-		Psest_3337	0.52	-0.4
3,502,211	-		Psest_3337	0.52	+0.8
3,502,243	+		Psest_3337	0.56	+0.1
3,502,243	+		Psest_3337	0.56	-0.8
3,502,243	+		Psest_3337	0.56	+0.4
3,502,243	+		Psest_3337	0.56	-0.9
3,502,243	+		Psest_3337	0.56	-0.5
3,502,244	-		Psest_3337	0.56	-0.2
3,502,244	-		Psest_3337	0.56	-0.0
3,502,244	-		Psest_3337	0.56	-0.5
3,502,301	-		Psest_3337	0.62	+1.2
3,502,301	-		Psest_3337	0.62	+0.2
3,502,363	+		Psest_3337	0.68	-1.2
3,502,363	+		Psest_3337	0.68	-0.6
3,502,363	+		Psest_3337	0.68	-0.1
3,502,363	+		Psest_3337	0.68	-1.5
3,502,363	+		Psest_3337	0.68	+0.2
3,502,364	-		Psest_3337	0.68	-0.1
3,502,447	+		Psest_3337	0.77	-0.2
3,502,447	+		Psest_3337	0.77	-0.2
3,502,447	+		Psest_3337	0.77	-0.5
3,502,448	-		Psest_3337	0.77	-0.5
3,502,448	-		Psest_3337	0.77	-1.5
3,502,502	+		Psest_3337	0.83	-1.4
3,502,503	-		Psest_3337	0.83	+0.1
3,502,503	-		Psest_3337	0.83	-1.6
3,502,551	-		Psest_3337	0.88	+0.9
3,502,678	+				-1.4
3,502,678	+				+1.4
3,502,678	+				-1.5
3,502,678	+				-0.2
3,502,678	+				-0.0
3,502,678	+				-1.3
3,502,678	+				+0.6
3,502,678	+				+0.8
3,502,679	-				-0.7
3,502,679	-				-1.0
3,502,679	-				+0.4
3,502,679	-				-0.3
3,502,679	-				-0.6
3,502,679	-				+0.5
3,502,679	-				-1.5
3,502,695	+				-0.8
3,502,695	+				-0.4
3,502,696	-				-0.3
3,502,885	-		Psest_3338	0.20	+2.0
3,503,004	-		Psest_3338	0.42	+0.9
3,503,004	-		Psest_3338	0.42	+0.2
3,503,167	-		Psest_3338	0.71	+0.1
3,503,429	+				+0.5
3,503,429	+				+0.3
3,503,429	+				+0.5
3,503,430	-				+0.4
3,503,430	-				+0.8
3,503,733	-		Psest_3339	0.29	-0.0
3,503,767	+		Psest_3339	0.32	-0.9
3,503,920	-		Psest_3339	0.44	-0.9
3,503,921	+		Psest_3339	0.44	+3.8
3,503,922	-		Psest_3339	0.44	-0.4
3,504,216	+		Psest_3339	0.68	+0.9
3,504,216	+		Psest_3339	0.68	+0.7
3,504,216	+		Psest_3339	0.68	-0.8
3,504,217	-		Psest_3339	0.68	+0.3
3,504,217	-		Psest_3339	0.68	-0.1
3,504,217	-		Psest_3339	0.68	-0.8
3,504,219	-		Psest_3339	0.68	-1.0
3,504,255	-		Psest_3339	0.71	-0.3
3,504,255	-		Psest_3339	0.71	-1.0
3,504,299	+		Psest_3339	0.74	-1.7
3,504,302	+		Psest_3339	0.75	+0.8
3,504,303	-		Psest_3339	0.75	-0.4
3,504,303	-		Psest_3339	0.75	-0.0