Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3202

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,372,479	+				+0.2
3,372,539	+				+0.0
3,372,540	-				+0.2
3,372,588	-		Psest_3201	0.12	-0.5
3,372,766	+		Psest_3201	0.35	-0.5
3,372,766	+		Psest_3201	0.35	+0.0
3,372,766	+		Psest_3201	0.35	-0.6
3,372,766	+		Psest_3201	0.35	+1.0
3,372,766	+		Psest_3201	0.35	+0.2
3,372,766	+		Psest_3201	0.35	-0.9
3,372,766	+		Psest_3201	0.35	+0.0
3,372,767	-		Psest_3201	0.35	+0.4
3,372,767	-		Psest_3201	0.35	+0.1
3,372,767	-		Psest_3201	0.35	-0.5
3,372,767	-		Psest_3201	0.35	+1.3
3,372,767	-		Psest_3201	0.35	-0.7
3,372,767	-		Psest_3201	0.35	+0.2
3,372,767	-		Psest_3201	0.35	-0.2
3,372,834	+		Psest_3201	0.43	+0.0
3,372,834	+		Psest_3201	0.43	+0.3
3,373,290	+				-0.6
3,373,290	+				-0.8
3,373,290	+				+0.7
3,373,290	+				+0.3
3,373,290	+				+0.4
3,373,291	-				-0.3
3,373,291	-				-0.3
3,373,291	-				-1.1
3,373,291	-				+0.4
3,373,464	+		Psest_3202	0.19	+0.5
3,373,464	+		Psest_3202	0.19	+1.4
3,373,502	-		Psest_3202	0.27	+0.7
3,373,502	-		Psest_3202	0.27	+0.6
3,373,622	-		Psest_3202	0.53	+1.6
3,373,701	+		Psest_3202	0.71	+0.4
3,373,702	-		Psest_3202	0.71	+0.2
3,373,702	-		Psest_3202	0.71	+0.1
3,373,864	-				+0.9
3,373,914	-				-1.4
3,373,914	-				-0.6
3,373,953	+				+0.7
3,373,953	+				+0.7
3,373,954	-				+1.1
3,374,073	+				+0.7
3,374,229	-		Psest_3203	0.27	-0.1
3,374,229	-		Psest_3203	0.27	+0.3
3,374,326	+		Psest_3203	0.42	+0.2
3,374,327	-		Psest_3203	0.42	+0.6
3,374,450	+		Psest_3203	0.62	-0.1
3,374,450	+		Psest_3203	0.62	+0.3
3,374,450	+		Psest_3203	0.62	+0.2
3,374,450	+		Psest_3203	0.62	+0.2
3,374,450	+		Psest_3203	0.62	+0.5
3,374,451	-		Psest_3203	0.62	-1.0
3,374,451	-		Psest_3203	0.62	-1.3
3,374,573	-		Psest_3203	0.81	+0.5
3,374,686	+				-0.5
3,374,686	+				-0.6
3,374,686	+				+0.0
3,374,686	+				+0.2
3,374,687	-				-1.4
3,374,703	+				+0.1
3,374,752	+				-0.2
3,374,752	+				-0.6
3,374,752	+				+0.2
3,374,752	+				+0.7
3,374,752	+				+0.3
3,374,752	+				-0.1
3,374,752	+				-0.4
3,374,752	+				-0.4
3,374,752	+				+1.5
3,374,752	+				+0.4
3,374,752	+				+0.2
3,374,752	+				-0.0
3,374,752	+				+0.0
3,374,752	+				+0.7
3,374,752	+				-0.0
3,374,752	+				-0.4
3,374,752	+				-0.1
3,374,752	+				-1.1
3,374,752	+				+0.7
3,374,752	+				+0.2
3,374,752	+				+0.1
3,374,753	-				+2.2
3,374,753	-				-0.6
3,374,753	-				+1.5
3,374,753	-				-0.4
3,374,753	-				-0.4
3,374,753	-				-0.2
3,374,753	-				-0.5
3,374,753	-				+1.3
3,374,753	-				-0.6
3,374,753	-				-0.1
3,374,753	-				+0.6
3,374,753	-				-0.6