Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3146

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,318,657	-				-0.3
3,318,657	-				+0.7
3,318,657	-				+0.4
3,318,657	-				+0.5
3,318,937	+				-0.2
3,318,937	+				-0.6
3,318,937	+				+0.0
3,318,937	+				-0.7
3,318,937	+				+0.5
3,318,937	+				+0.6
3,318,937	+				+0.2
3,318,937	+				+0.6
3,318,937	+				+0.3
3,318,937	+				-0.6
3,318,938	-				+0.7
3,318,938	-				+0.6
3,318,938	-				+0.0
3,318,938	-				-0.7
3,318,938	-				-0.6
3,318,941	+				+0.2
3,318,942	-				+0.5
3,318,942	-				+0.4
3,318,942	-				+0.4
3,319,010	+				-0.2
3,319,113	-				+0.1
3,319,199	+				+0.1
3,319,264	+				-0.3
3,319,349	+				+1.1
3,319,454	-		Psest_3145	0.36	-0.4
3,319,587	-		Psest_3145	0.83	-0.1
3,319,689	-		Psest_3146	0.27	+1.3
3,319,768	+		Psest_3146	0.64	+0.8
3,319,793	-		Psest_3146	0.76	-0.3
3,319,827	-				+0.7
3,319,827	-				+0.2
3,319,827	-				+0.2
3,320,088	-		Psest_3148	0.50	+0.5
3,320,461	+				+0.5
3,320,540	+		Psest_3150	0.16	+0.4
3,320,541	-		Psest_3150	0.16	+0.1
3,320,638	+		Psest_3150	0.24	+0.8
3,320,665	+		Psest_3150	0.26	-0.4
3,320,666	-		Psest_3150	0.26	+0.3
3,320,679	+		Psest_3150	0.27	+0.3
3,320,701	-		Psest_3150	0.29	+1.1
3,320,736	-		Psest_3150	0.32	+0.1
3,320,802	+		Psest_3150	0.37	+0.4