Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3143

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,315,897	+		Psest_3141	0.53	+0.1
3,315,897	+		Psest_3141	0.53	+0.7
3,315,897	+		Psest_3141	0.53	-0.1
3,315,897	+		Psest_3141	0.53	+0.7
3,315,898	-		Psest_3141	0.53	-0.0
3,315,898	-		Psest_3141	0.53	+0.6
3,315,898	-		Psest_3141	0.53	+0.2
3,315,900	-		Psest_3141	0.53	-0.3
3,315,900	-		Psest_3141	0.53	-0.6
3,315,900	-		Psest_3141	0.53	-0.2
3,315,900	-		Psest_3141	0.53	+0.2
3,315,933	+		Psest_3141	0.59	+0.0
3,315,933	+		Psest_3141	0.59	+0.5
3,315,933	+		Psest_3141	0.59	-0.5
3,315,933	+		Psest_3141	0.59	+1.5
3,315,933	+		Psest_3141	0.59	+0.3
3,315,933	+		Psest_3141	0.59	-0.3
3,315,933	+		Psest_3141	0.59	-0.6
3,315,933	+		Psest_3141	0.59	-0.5
3,315,933	+		Psest_3141	0.59	+0.9
3,315,933	+		Psest_3141	0.59	+0.5
3,315,933	+		Psest_3141	0.59	+0.3
3,315,933	+		Psest_3141	0.59	+1.5
3,315,933	+		Psest_3141	0.59	+0.4
3,315,933	+		Psest_3141	0.59	-0.3
3,315,933	+		Psest_3141	0.59	+0.7
3,315,933	+		Psest_3141	0.59	-0.5
3,315,933	+		Psest_3141	0.59	-0.6
3,315,933	+		Psest_3141	0.59	-1.2
3,315,933	+		Psest_3141	0.59	-0.4
3,315,934	-		Psest_3141	0.59	+0.1
3,315,934	-		Psest_3141	0.59	+0.7
3,315,934	-		Psest_3141	0.59	-0.7
3,315,934	-		Psest_3141	0.59	-0.4
3,315,934	-		Psest_3141	0.59	+0.5
3,315,934	-		Psest_3141	0.59	-0.5
3,315,934	-		Psest_3141	0.59	-0.3
3,315,934	-		Psest_3141	0.59	-1.5
3,315,934	-		Psest_3141	0.59	-0.3
3,315,934	-		Psest_3141	0.59	-0.4
3,315,934	-		Psest_3141	0.59	+0.6
3,315,934	-		Psest_3141	0.59	+0.8
3,315,934	-		Psest_3141	0.59	+0.7
3,315,934	-		Psest_3141	0.59	+0.7
3,315,934	-		Psest_3141	0.59	+0.2
3,315,934	-		Psest_3141	0.59	-0.2
3,315,934	-		Psest_3141	0.59	+0.3
3,315,934	-		Psest_3141	0.59	-0.0
3,316,064	-		Psest_3141	0.82	-0.9
3,316,064	-		Psest_3141	0.82	+0.3
3,316,064	-		Psest_3141	0.82	-0.1
3,316,064	-		Psest_3141	0.82	+0.3
3,316,064	-		Psest_3141	0.82	+0.1
3,316,064	-		Psest_3141	0.82	+1.3
3,316,064	-		Psest_3141	0.82	+0.4
3,316,257	+				+0.7
3,316,257	+				+0.8
3,316,258	-				-0.0
3,316,287	+		Psest_3142	0.13	-0.2
3,316,453	+		Psest_3142	0.46	+0.2
3,316,453	+		Psest_3142	0.46	+0.4
3,316,453	+		Psest_3142	0.46	+0.3
3,316,453	+		Psest_3142	0.46	+0.8
3,316,453	+		Psest_3142	0.46	+0.3
3,316,453	+		Psest_3142	0.46	+0.7
3,316,453	+		Psest_3142	0.46	+0.6
3,316,454	-		Psest_3142	0.46	-0.2
3,316,454	-		Psest_3142	0.46	+0.0
3,316,454	-		Psest_3142	0.46	-0.1
3,316,454	-		Psest_3142	0.46	+0.3
3,316,482	+		Psest_3142	0.52	+0.1
3,316,482	+		Psest_3142	0.52	+0.1
3,316,483	-		Psest_3142	0.52	-0.0
3,316,483	-		Psest_3142	0.52	+0.8
3,316,483	-		Psest_3142	0.52	+0.3
3,316,486	+		Psest_3142	0.52	-0.4
3,316,486	+		Psest_3142	0.52	-0.2
3,316,486	+		Psest_3142	0.52	+0.1
3,316,486	+		Psest_3142	0.52	+0.5
3,316,486	+		Psest_3142	0.52	+0.2
3,316,486	+		Psest_3142	0.52	+0.2
3,316,486	+		Psest_3142	0.52	-1.3
3,316,486	+		Psest_3142	0.52	+0.2
3,316,486	+		Psest_3142	0.52	+1.3
3,316,486	+		Psest_3142	0.52	-0.4
3,316,486	+		Psest_3142	0.52	+0.1
3,316,486	+		Psest_3142	0.52	-0.4
3,316,486	+		Psest_3142	0.52	-0.7
3,316,487	-		Psest_3142	0.53	+0.0
3,316,487	-		Psest_3142	0.53	+0.2
3,316,487	-		Psest_3142	0.53	+0.7
3,316,487	-		Psest_3142	0.53	-0.4
3,316,487	-		Psest_3142	0.53	-0.3
3,316,487	-		Psest_3142	0.53	+0.8
3,316,487	-		Psest_3142	0.53	+0.2
3,316,487	-		Psest_3142	0.53	+0.5
3,316,679	+				-0.1
3,316,679	+				-1.2
3,316,680	-				+0.6
3,316,680	-				+0.2
3,316,811	+		Psest_3143	0.11	+0.6
3,316,812	-		Psest_3143	0.11	+1.1
3,316,812	-		Psest_3143	0.11	+0.1
3,316,812	-		Psest_3143	0.11	+0.6
3,316,858	-		Psest_3143	0.25	-0.0
3,316,906	+		Psest_3143	0.41	+0.3
3,316,907	-		Psest_3143	0.41	+0.2
3,316,936	-		Psest_3143	0.50	-0.3
3,316,978	+		Psest_3143	0.63	+0.4
3,317,011	+		Psest_3143	0.74	+0.1
3,317,159	+				+0.1
3,317,246	+				+0.5
3,317,247	-				+0.2
3,317,247	-				-0.3
3,317,464	-		Psest_3144	0.18	-1.2
3,317,464	-		Psest_3144	0.18	+0.8
3,317,464	-		Psest_3144	0.18	-0.9
3,317,470	+		Psest_3144	0.18	+0.3
3,317,557	-		Psest_3144	0.24	+0.1
3,317,832	+		Psest_3144	0.42	+0.9
3,317,833	-		Psest_3144	0.42	-0.7
3,317,833	-		Psest_3144	0.42	+1.6
3,317,833	-		Psest_3144	0.42	+1.0
3,317,833	-		Psest_3144	0.42	+0.5
3,317,839	+		Psest_3144	0.42	-0.5
3,317,839	+		Psest_3144	0.42	-0.5
3,317,839	+		Psest_3144	0.42	-0.5
3,317,839	+		Psest_3144	0.42	-0.7
3,317,839	+		Psest_3144	0.42	+0.6
3,317,839	+		Psest_3144	0.42	-0.4
3,317,839	+		Psest_3144	0.42	+0.1
3,317,839	+		Psest_3144	0.42	+0.0
3,317,840	-		Psest_3144	0.42	+0.5
3,317,840	-		Psest_3144	0.42	+0.3
3,317,840	-		Psest_3144	0.42	+0.8
3,317,840	-		Psest_3144	0.42	+0.5
3,317,840	-		Psest_3144	0.42	+0.0
3,317,840	-		Psest_3144	0.42	+0.3
3,317,840	-		Psest_3144	0.42	+2.3
3,317,855	+		Psest_3144	0.43	+0.0
3,318,018	+		Psest_3144	0.54	+0.0
3,318,018	+		Psest_3144	0.54	-0.7
3,318,018	+		Psest_3144	0.54	-0.1
3,318,018	+		Psest_3144	0.54	+0.6
3,318,018	+		Psest_3144	0.54	-2.1
3,318,018	+		Psest_3144	0.54	-0.3
3,318,019	-		Psest_3144	0.54	-0.4
3,318,019	-		Psest_3144	0.54	+0.5
3,318,019	-		Psest_3144	0.54	+0.9
3,318,019	-		Psest_3144	0.54	+0.9
3,318,019	-		Psest_3144	0.54	+1.2
3,318,019	-		Psest_3144	0.54	+0.8
3,318,019	-		Psest_3144	0.54	-0.4
3,318,040	+		Psest_3144	0.55	+0.7
3,318,040	+		Psest_3144	0.55	+0.4
3,318,040	+		Psest_3144	0.55	+0.2
3,318,040	+		Psest_3144	0.55	-3.1
3,318,040	+		Psest_3144	0.55	+0.3
3,318,040	+		Psest_3144	0.55	-0.0
3,318,041	-		Psest_3144	0.56	+0.3
3,318,041	-		Psest_3144	0.56	+0.5
3,318,041	-		Psest_3144	0.56	+0.5
3,318,041	-		Psest_3144	0.56	-0.1