Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3090

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,268,475	-				+0.1
3,268,564	-				+0.3
3,269,589	-		Psest_3090	0.37	+1.7
3,269,592	+		Psest_3090	0.38	-1.9
3,269,592	+		Psest_3090	0.38	-0.4
3,269,592	+		Psest_3090	0.38	-0.5
3,269,592	+		Psest_3090	0.38	-0.5
3,269,592	+		Psest_3090	0.38	-2.9
3,269,593	-		Psest_3090	0.38	-2.4
3,269,593	-		Psest_3090	0.38	+1.1
3,269,593	-		Psest_3090	0.38	-0.4
3,269,593	-		Psest_3090	0.38	-0.5
3,269,593	-		Psest_3090	0.38	+0.6
3,269,593	-		Psest_3090	0.38	+0.7
3,269,593	-		Psest_3090	0.38	-1.5
3,269,593	-		Psest_3090	0.38	+1.1
3,269,593	-		Psest_3090	0.38	-0.9
3,269,593	-		Psest_3090	0.38	-0.3
3,269,593	-		Psest_3090	0.38	+0.2
3,269,701	+		Psest_3090	0.54	+0.3
3,269,701	+		Psest_3090	0.54	-0.8
3,269,702	-		Psest_3090	0.54	-0.7
3,269,767	+		Psest_3090	0.63	-0.5
3,269,767	+		Psest_3090	0.63	-0.5
3,269,767	+		Psest_3090	0.63	+0.1
3,269,767	+		Psest_3090	0.63	-0.8
3,269,767	+		Psest_3090	0.63	-1.5
3,269,768	-		Psest_3090	0.63	-0.3
3,269,768	-		Psest_3090	0.63	-0.2
3,269,768	-		Psest_3090	0.63	-0.9
3,269,983	+				-0.2
3,269,984	-				+0.0