Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3031

Experiment: 5-Hydroxymethylfurfural 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 5 mM
3,216,159	+		Psest_3030	0.21	-0.3
3,216,248	+		Psest_3030	0.29	+0.4
3,216,248	+		Psest_3030	0.29	+0.2
3,216,248	+		Psest_3030	0.29	-0.0
3,216,248	+		Psest_3030	0.29	-0.7
3,216,249	-		Psest_3030	0.30	-1.5
3,216,249	-		Psest_3030	0.30	-0.5
3,216,477	+		Psest_3030	0.51	-0.0
3,216,478	-		Psest_3030	0.51	-0.2
3,216,478	-		Psest_3030	0.51	+0.1
3,216,478	-		Psest_3030	0.51	+0.9
3,216,478	-		Psest_3030	0.51	-0.8
3,216,478	-		Psest_3030	0.51	+0.9
3,216,478	-		Psest_3030	0.51	-1.1
3,216,518	+		Psest_3030	0.55	-1.0
3,216,576	+		Psest_3030	0.60	+0.1
3,216,692	+		Psest_3030	0.71	-3.5
3,216,692	+		Psest_3030	0.71	-0.5
3,216,693	-		Psest_3030	0.71	-1.3
3,216,693	-		Psest_3030	0.71	+0.2
3,216,759	-		Psest_3030	0.77	-1.6
3,216,985	+				+0.2
3,216,985	+				-0.1
3,216,985	+				+0.6
3,216,986	-				+0.9
3,216,986	-				+0.2
3,216,986	-				-1.8
3,217,135	+		Psest_3031	0.89	+0.9
3,217,254	-				-1.3
3,217,270	-				+0.1
3,217,305	+				+0.5
3,217,306	-				-0.9
3,217,306	-				+0.6
3,217,306	-				-0.2
3,217,306	-				+0.4
3,217,308	+				+0.1
3,217,746	-		Psest_3033	0.30	+0.2
3,217,772	+		Psest_3033	0.34	+0.4
3,217,940	+		Psest_3033	0.54	+0.0
3,217,940	+		Psest_3033	0.54	-0.3
3,217,941	-		Psest_3033	0.54	+0.1
3,217,941	-		Psest_3033	0.54	+0.6
3,217,941	-		Psest_3033	0.54	-0.4
3,217,941	-		Psest_3033	0.54	+1.1
3,218,018	+		Psest_3033	0.63	-1.3
3,218,018	+		Psest_3033	0.63	-0.8
3,218,019	-		Psest_3033	0.64	+0.9
3,218,019	-		Psest_3033	0.64	-0.2
3,218,019	-		Psest_3033	0.64	-0.9
3,218,019	-		Psest_3033	0.64	-0.6
3,218,019	-		Psest_3033	0.64	+1.0
3,218,022	+		Psest_3033	0.64	+0.4
3,218,023	-		Psest_3033	0.64	+0.9
3,218,023	-		Psest_3033	0.64	-0.6
3,218,023	-		Psest_3033	0.64	+1.5
3,218,023	-		Psest_3033	0.64	+0.8
3,218,042	+		Psest_3033	0.66	+1.2
3,218,042	+		Psest_3033	0.66	-0.0
3,218,042	+		Psest_3033	0.66	-0.0
3,218,043	-		Psest_3033	0.66	+0.4
3,218,043	-		Psest_3033	0.66	-0.4